Gene : Solyc07g022760.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11864:SF0 - PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST) Description:  Pre-mRNA-processing factor 40 homolog A (AHRD V1 *--- PR40A_MOUSE); contains Interpro domain(s) IPR002713 FF domain
Genomic Order:  768 Name:  ? Solyc07g022760.2
Secondary Identifier:  ? PAC:36160033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g022760.2 0.5kb upstream 0.5kb upstream 33370 true SL2.50ch07: 21372129-21405498 Solanum lycopersicum
Solyc07g022760.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 21404999-21405498 Solanum lycopersicum
Solyc07g022760.2 0.5kb downstream 0.5kb downstream 33370 true SL2.50ch07: 21371629-21404998 Solanum lycopersicum
Solyc07g022760.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 21371629-21372128 Solanum lycopersicum
Solyc07g022760.2 1.0kb upstream 1.0kb upstream 33870 true SL2.50ch07: 21372129-21405998 Solanum lycopersicum
Solyc07g022760.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 21404999-21405998 Solanum lycopersicum
Solyc07g022760.2 1.0kb downstream 1.0kb downstream 33870 true SL2.50ch07: 21371129-21404998 Solanum lycopersicum
Solyc07g022760.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 21371129-21372128 Solanum lycopersicum
Solyc07g022760.2 2.0kb upstream 2.0kb upstream 34870 true SL2.50ch07: 21372129-21406998 Solanum lycopersicum
Solyc07g022760.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 21404999-21406998 Solanum lycopersicum
Solyc07g022760.2 2.0kb downstream 2.0kb downstream 34870 true SL2.50ch07: 21370129-21404998 Solanum lycopersicum
Solyc07g022760.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 21370129-21372128 Solanum lycopersicum
Solyc07g022760.2 5.0kb upstream 5.0kb upstream 37870 true SL2.50ch07: 21372129-21409998 Solanum lycopersicum
Solyc07g022760.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 21404999-21409998 Solanum lycopersicum
Solyc07g022760.2 5.0kb downstream 5.0kb downstream 37870 true SL2.50ch07: 21367129-21404998 Solanum lycopersicum
Solyc07g022760.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 21367129-21372128 Solanum lycopersicum
Solyc07g022760.2 10.0kb upstream 10.0kb upstream 42870 true SL2.50ch07: 21372129-21414998 Solanum lycopersicum
Solyc07g022760.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 21404999-21414998 Solanum lycopersicum
Solyc07g022760.2 10.0kb downstream 10.0kb downstream 42870 true SL2.50ch07: 21362129-21404998 Solanum lycopersicum
Solyc07g022760.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 21362129-21372128 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469821 5263 Asterids View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain