Gene : Solyc09g064660.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Description:  Small nuclear ribonucleoprotein Sm D1 (AHRD V1 ***- B6TXH2_MAIZE); contains Interpro domain(s) IPR006649 Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
Genomic Order:  1505 Name:  ? Solyc09g064660.2
Secondary Identifier:  ? PAC:36131664
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g064660.2 0.5kb upstream 0.5kb upstream 4496 true SL2.50ch09: 61979948-61984443 Solanum lycopersicum
Solyc09g064660.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 61979948-61980447 Solanum lycopersicum
Solyc09g064660.2 0.5kb downstream 0.5kb downstream 4496 true SL2.50ch09: 61980448-61984943 Solanum lycopersicum
Solyc09g064660.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 61984444-61984943 Solanum lycopersicum
Solyc09g064660.2 1.0kb upstream 1.0kb upstream 4996 true SL2.50ch09: 61979448-61984443 Solanum lycopersicum
Solyc09g064660.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 61979448-61980447 Solanum lycopersicum
Solyc09g064660.2 1.0kb downstream 1.0kb downstream 4996 true SL2.50ch09: 61980448-61985443 Solanum lycopersicum
Solyc09g064660.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 61984444-61985443 Solanum lycopersicum
Solyc09g064660.2 2.0kb upstream 2.0kb upstream 5996 true SL2.50ch09: 61978448-61984443 Solanum lycopersicum
Solyc09g064660.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 61978448-61980447 Solanum lycopersicum
Solyc09g064660.2 2.0kb downstream 2.0kb downstream 5996 true SL2.50ch09: 61980448-61986443 Solanum lycopersicum
Solyc09g064660.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 61984444-61986443 Solanum lycopersicum
Solyc09g064660.2 5.0kb upstream 5.0kb upstream 8996 true SL2.50ch09: 61975448-61984443 Solanum lycopersicum
Solyc09g064660.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 61975448-61980447 Solanum lycopersicum
Solyc09g064660.2 5.0kb downstream 5.0kb downstream 8996 true SL2.50ch09: 61980448-61989443 Solanum lycopersicum
Solyc09g064660.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 61984444-61989443 Solanum lycopersicum
Solyc09g064660.2 10.0kb upstream 10.0kb upstream 13996 true SL2.50ch09: 61970448-61984443 Solanum lycopersicum
Solyc09g064660.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 61970448-61980447 Solanum lycopersicum
Solyc09g064660.2 10.0kb downstream 10.0kb downstream 13996 true SL2.50ch09: 61980448-61994443 Solanum lycopersicum
Solyc09g064660.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 61984444-61994443 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480454 5263 Asterids View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain