Gene : Solyc06g068320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K01881 - prolyl-tRNA synthetase (PARS, proS) Description:  Prolyl-tRNA synthetase (AHRD V1 **** Q54Q07_DICDI); contains Interpro domain(s) IPR004499 Prolyl-tRNA synthetase, class IIa, prokaryotic-type
Genomic Order:  1788 Name:  ? Solyc06g068320.2
Secondary Identifier:  ? PAC:36131208
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g068320.2 0.5kb upstream 0.5kb upstream 8213 true SL2.50ch06: 42320107-42328319 Solanum lycopersicum
Solyc06g068320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 42327820-42328319 Solanum lycopersicum
Solyc06g068320.2 0.5kb downstream 0.5kb downstream 8213 true SL2.50ch06: 42319607-42327819 Solanum lycopersicum
Solyc06g068320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 42319607-42320106 Solanum lycopersicum
Solyc06g068320.2 1.0kb upstream 1.0kb upstream 8713 true SL2.50ch06: 42320107-42328819 Solanum lycopersicum
Solyc06g068320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 42327820-42328819 Solanum lycopersicum
Solyc06g068320.2 1.0kb downstream 1.0kb downstream 8713 true SL2.50ch06: 42319107-42327819 Solanum lycopersicum
Solyc06g068320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 42319107-42320106 Solanum lycopersicum
Solyc06g068320.2 2.0kb upstream 2.0kb upstream 9713 true SL2.50ch06: 42320107-42329819 Solanum lycopersicum
Solyc06g068320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 42327820-42329819 Solanum lycopersicum
Solyc06g068320.2 2.0kb downstream 2.0kb downstream 9713 true SL2.50ch06: 42318107-42327819 Solanum lycopersicum
Solyc06g068320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 42318107-42320106 Solanum lycopersicum
Solyc06g068320.2 5.0kb upstream 5.0kb upstream 12713 true SL2.50ch06: 42320107-42332819 Solanum lycopersicum
Solyc06g068320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 42327820-42332819 Solanum lycopersicum
Solyc06g068320.2 5.0kb downstream 5.0kb downstream 12713 true SL2.50ch06: 42315107-42327819 Solanum lycopersicum
Solyc06g068320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 42315107-42320106 Solanum lycopersicum
Solyc06g068320.2 10.0kb upstream 10.0kb upstream 17713 true SL2.50ch06: 42320107-42337819 Solanum lycopersicum
Solyc06g068320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 42327820-42337819 Solanum lycopersicum
Solyc06g068320.2 10.0kb downstream 10.0kb downstream 17713 true SL2.50ch06: 42310107-42327819 Solanum lycopersicum
Solyc06g068320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 42310107-42320106 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471535 5263 Asterids View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain