Gene : Solyc06g084310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Description:  Small nuclear ribonucleoprotein Sm D1 (AHRD V1 ***- B6TXH2_MAIZE); contains Interpro domain(s) IPR006649 Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
Genomic Order:  2781 Name:  ? Solyc06g084310.2
Secondary Identifier:  ? PAC:36129486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g084310.2 0.5kb upstream 0.5kb upstream 3435 true SL2.50ch06: 49481963-49485397 Solanum lycopersicum
Solyc06g084310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 49484898-49485397 Solanum lycopersicum
Solyc06g084310.2 0.5kb downstream 0.5kb downstream 3435 true SL2.50ch06: 49481463-49484897 Solanum lycopersicum
Solyc06g084310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 49481463-49481962 Solanum lycopersicum
Solyc06g084310.2 1.0kb upstream 1.0kb upstream 3935 true SL2.50ch06: 49481963-49485897 Solanum lycopersicum
Solyc06g084310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 49484898-49485897 Solanum lycopersicum
Solyc06g084310.2 1.0kb downstream 1.0kb downstream 3935 true SL2.50ch06: 49480963-49484897 Solanum lycopersicum
Solyc06g084310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 49480963-49481962 Solanum lycopersicum
Solyc06g084310.2 2.0kb upstream 2.0kb upstream 4935 true SL2.50ch06: 49481963-49486897 Solanum lycopersicum
Solyc06g084310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 49484898-49486897 Solanum lycopersicum
Solyc06g084310.2 2.0kb downstream 2.0kb downstream 4935 true SL2.50ch06: 49479963-49484897 Solanum lycopersicum
Solyc06g084310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 49479963-49481962 Solanum lycopersicum
Solyc06g084310.2 5.0kb upstream 5.0kb upstream 7935 true SL2.50ch06: 49481963-49489897 Solanum lycopersicum
Solyc06g084310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 49484898-49489897 Solanum lycopersicum
Solyc06g084310.2 5.0kb downstream 5.0kb downstream 7935 true SL2.50ch06: 49476963-49484897 Solanum lycopersicum
Solyc06g084310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 49476963-49481962 Solanum lycopersicum
Solyc06g084310.2 10.0kb upstream 10.0kb upstream 12935 true SL2.50ch06: 49481963-49494897 Solanum lycopersicum
Solyc06g084310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 49484898-49494897 Solanum lycopersicum
Solyc06g084310.2 10.0kb downstream 10.0kb downstream 12935 true SL2.50ch06: 49471963-49484897 Solanum lycopersicum
Solyc06g084310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 49471963-49481962 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480454 5263 Asterids View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain