Gene : Solyc11g006030.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR22849:SF43 - U-BOX DOMAIN-CONTAINING PROTEIN 54-RELATED Description:  U-box domain-containing protein (AHRD V1 ***- D7MID4_ARALY); contains Interpro domain(s) IPR003613 U box domain
Genomic Order:  104 Name:  ? Solyc11g006030.1
Secondary Identifier:  ? PAC:36153754
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g006030.1 0.5kb upstream 0.5kb upstream 1793 true SL2.50ch11: 840424-842216 Solanum lycopersicum
Solyc11g006030.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 841717-842216 Solanum lycopersicum
Solyc11g006030.1 0.5kb downstream 0.5kb downstream 1793 true SL2.50ch11: 839924-841716 Solanum lycopersicum
Solyc11g006030.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 839924-840423 Solanum lycopersicum
Solyc11g006030.1 1.0kb upstream 1.0kb upstream 2293 true SL2.50ch11: 840424-842716 Solanum lycopersicum
Solyc11g006030.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 841717-842716 Solanum lycopersicum
Solyc11g006030.1 1.0kb downstream 1.0kb downstream 2293 true SL2.50ch11: 839424-841716 Solanum lycopersicum
Solyc11g006030.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 839424-840423 Solanum lycopersicum
Solyc11g006030.1 2.0kb upstream 2.0kb upstream 3293 true SL2.50ch11: 840424-843716 Solanum lycopersicum
Solyc11g006030.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 841717-843716 Solanum lycopersicum
Solyc11g006030.1 2.0kb downstream 2.0kb downstream 3293 true SL2.50ch11: 838424-841716 Solanum lycopersicum
Solyc11g006030.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 838424-840423 Solanum lycopersicum
Solyc11g006030.1 5.0kb upstream 5.0kb upstream 6293 true SL2.50ch11: 840424-846716 Solanum lycopersicum
Solyc11g006030.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 841717-846716 Solanum lycopersicum
Solyc11g006030.1 5.0kb downstream 5.0kb downstream 6293 true SL2.50ch11: 835424-841716 Solanum lycopersicum
Solyc11g006030.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 835424-840423 Solanum lycopersicum
Solyc11g006030.1 10.0kb upstream 10.0kb upstream 11293 true SL2.50ch11: 840424-851716 Solanum lycopersicum
Solyc11g006030.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 841717-851716 Solanum lycopersicum
Solyc11g006030.1 10.0kb downstream 10.0kb downstream 11293 true SL2.50ch11: 830424-841716 Solanum lycopersicum
Solyc11g006030.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 830424-840423 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473176 5263 Asterids View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain