Gene : AUR62016997 C. quinoa v1.0
Defline:  (1 of 4) PTHR11544 - COLD SHOCK DOMAIN CONTAINING PROTEINS Genomic Order:  103
Name:  ? AUR62016997 Secondary Identifier:  ? PAC:36309731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62016997 0.5kb upstream 0.5kb upstream 1391 true C_Quinoa_Scaffold_3787: 1648584-1649974 Chenopodium quinoa
AUR62016997 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3787: 1648584-1649083 Chenopodium quinoa
AUR62016997 0.5kb downstream 0.5kb downstream 1391 true C_Quinoa_Scaffold_3787: 1649084-1650474 Chenopodium quinoa
AUR62016997 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3787: 1649975-1650474 Chenopodium quinoa
AUR62016997 1.0kb upstream 1.0kb upstream 1891 true C_Quinoa_Scaffold_3787: 1648084-1649974 Chenopodium quinoa
AUR62016997 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3787: 1648084-1649083 Chenopodium quinoa
AUR62016997 1.0kb downstream 1.0kb downstream 1891 true C_Quinoa_Scaffold_3787: 1649084-1650974 Chenopodium quinoa
AUR62016997 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3787: 1649975-1650974 Chenopodium quinoa
AUR62016997 2.0kb upstream 2.0kb upstream 2891 true C_Quinoa_Scaffold_3787: 1647084-1649974 Chenopodium quinoa
AUR62016997 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3787: 1647084-1649083 Chenopodium quinoa
AUR62016997 2.0kb downstream 2.0kb downstream 2891 true C_Quinoa_Scaffold_3787: 1649084-1651974 Chenopodium quinoa
AUR62016997 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3787: 1649975-1651974 Chenopodium quinoa
AUR62016997 5.0kb upstream 5.0kb upstream 5891 true C_Quinoa_Scaffold_3787: 1644084-1649974 Chenopodium quinoa
AUR62016997 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3787: 1644084-1649083 Chenopodium quinoa
AUR62016997 5.0kb downstream 5.0kb downstream 5891 true C_Quinoa_Scaffold_3787: 1649084-1654974 Chenopodium quinoa
AUR62016997 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3787: 1649975-1654974 Chenopodium quinoa
AUR62016997 10.0kb upstream 10.0kb upstream 10891 true C_Quinoa_Scaffold_3787: 1639084-1649974 Chenopodium quinoa
AUR62016997 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3787: 1639084-1649083 Chenopodium quinoa
AUR62016997 10.0kb downstream 10.0kb downstream 10891 true C_Quinoa_Scaffold_3787: 1649084-1659974 Chenopodium quinoa
AUR62016997 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3787: 1649975-1659974 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029141 5273 Angiosperm View MSA
123753367 5271 Pentapetalae View MSA
122775077 5272 Eudicot View MSA
121298527 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain