Gene : AUR62012056 C. quinoa v1.0
Defline:  (1 of 37) PF00153//PF14227 - Mitochondrial carrier protein (Mito_carr) // gag-polypeptide of LTR copia-type (UBN2_2) Genomic Order:  367
Name:  ? AUR62012056 Secondary Identifier:  ? PAC:36311595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62012056 0.5kb upstream 0.5kb upstream 2746 true C_Quinoa_Scaffold_2008: 5710568-5713313 Chenopodium quinoa
AUR62012056 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2008: 5710568-5711067 Chenopodium quinoa
AUR62012056 0.5kb downstream 0.5kb downstream 2746 true C_Quinoa_Scaffold_2008: 5711068-5713813 Chenopodium quinoa
AUR62012056 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2008: 5713314-5713813 Chenopodium quinoa
AUR62012056 1.0kb upstream 1.0kb upstream 3246 true C_Quinoa_Scaffold_2008: 5710068-5713313 Chenopodium quinoa
AUR62012056 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2008: 5710068-5711067 Chenopodium quinoa
AUR62012056 1.0kb downstream 1.0kb downstream 3246 true C_Quinoa_Scaffold_2008: 5711068-5714313 Chenopodium quinoa
AUR62012056 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2008: 5713314-5714313 Chenopodium quinoa
AUR62012056 2.0kb upstream 2.0kb upstream 4246 true C_Quinoa_Scaffold_2008: 5709068-5713313 Chenopodium quinoa
AUR62012056 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2008: 5709068-5711067 Chenopodium quinoa
AUR62012056 2.0kb downstream 2.0kb downstream 4246 true C_Quinoa_Scaffold_2008: 5711068-5715313 Chenopodium quinoa
AUR62012056 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2008: 5713314-5715313 Chenopodium quinoa
AUR62012056 5.0kb upstream 5.0kb upstream 7246 true C_Quinoa_Scaffold_2008: 5706068-5713313 Chenopodium quinoa
AUR62012056 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2008: 5706068-5711067 Chenopodium quinoa
AUR62012056 5.0kb downstream 5.0kb downstream 7246 true C_Quinoa_Scaffold_2008: 5711068-5718313 Chenopodium quinoa
AUR62012056 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2008: 5713314-5718313 Chenopodium quinoa
AUR62012056 10.0kb upstream 10.0kb upstream 12246 true C_Quinoa_Scaffold_2008: 5701068-5713313 Chenopodium quinoa
AUR62012056 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2008: 5701068-5711067 Chenopodium quinoa
AUR62012056 10.0kb downstream 10.0kb downstream 12246 true C_Quinoa_Scaffold_2008: 5711068-5723313 Chenopodium quinoa
AUR62012056 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2008: 5713314-5723313 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123753005 5271 Pentapetalae View MSA
122774912 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain