81 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Cucsa.235650 | (1 of 1) PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN | C. sativus v1.0 |
2712
 |
scaffold02012: 257623-260334 | |
| Thecc1EG003737 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
552341
|
scaffold_1: 26158397-26710737 | |
| Thecc1EG003331 | Uncharacterized protein (91%P) | T. cacao v1.1 |
17661
|
scaffold_1: 21990535-22008195 | |
| Thecc1EG004093 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
1922
|
scaffold_1: 29135408-29137329 | |
| Thecc1EG004328 | (1 of 3) PF00665//PF13456 - Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
4108
|
scaffold_1: 31012503-31016610 | |
| Thecc1EG004724 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
1150
|
scaffold_1: 33146594-33147743 | |
| Thecc1EG046262 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
2269
|
scaffold_184: 2-2270 | |
| Thecc1EG008034 | (1 of 7) 2.7.7.49//2.7.7.7//3.1.13.2//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Exoribonuclease H // Ribonuclease H / RNase H | T. cacao v1.1 |
1825
|
scaffold_2: 10625712-10627536 | |
| Thecc1EG010987 | (1 of 4) PF00078//PF00665//PF13456 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
8162
|
scaffold_2: 37167170-37175331 | |
| Thecc1EG011547 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
1492
|
scaffold_2: 40687807-40689298 | |
| Thecc1EG046298 | RNA-directed DNA polymerase (Reverse transcriptase) | T. cacao v1.1 |
1614
|
scaffold_230: 1006-2619 | |
| Thecc1EG012304 | (1 of 11) PF00078//PF13456 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
4679
|
scaffold_3: 2125756-2130434 | |
| Thecc1EG012620 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
1064
|
scaffold_3: 4326405-4327468 | |
| Thecc1EG012814 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
10804
|
scaffold_3: 6223707-6234510 | |
| Thecc1EG014031 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
23102
|
scaffold_3: 19340858-19363959 | |
| Thecc1EG015097 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
1584
|
scaffold_3: 26206019-26207602 | |
| Thecc1EG016264 | (1 of 4) PF00078//PF00665//PF13456 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
3089
|
scaffold_3: 32126079-32129167 | |
| Thecc1EG046095 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
956
|
scaffold_37: 64466-65421 | |
| Thecc1EG018990 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
64424
|
scaffold_4: 19434336-19498759 | |
| Thecc1EG018975 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
1084
|
scaffold_4: 19324428-19325511 | |
| Thecc1EG019238 | (1 of 7) 2.7.7.49//2.7.7.7//3.1.13.2//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Exoribonuclease H // Ribonuclease H / RNase H | T. cacao v1.1 |
2058
|
scaffold_4: 21211155-21213212 | |
| Thecc1EG020600 | (1 of 4) PF00078//PF00665//PF13456 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
7339
|
scaffold_4: 29336703-29344041 | |
| Thecc1EG022674 | (1 of 7) 2.7.7.49//2.7.7.7//3.1.13.2//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Exoribonuclease H // Ribonuclease H / RNase H | T. cacao v1.1 |
17117
|
scaffold_5: 6450464-6467580 | |
| Thecc1EG025982 | (1 of 6) PF00078//PF00665//PF13456 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
4567
|
scaffold_5: 35848061-35852627 | |
| Thecc1EG028282 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
2245
|
scaffold_6: 13251525-13253769 | |
| Thecc1EG029732 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
1289
|
scaffold_6: 24076316-24077604 | |
| Thecc1EG032605 | (1 of 7) 2.7.7.49//2.7.7.7//3.1.13.2//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Exoribonuclease H // Ribonuclease H / RNase H | T. cacao v1.1 |
1928
|
scaffold_7: 12548075-12550002 | |
| Thecc1EG034704 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
2000
|
scaffold_8: 4394034-4396033 | |
| Thecc1EG037531 | (1 of 3) PF00665//PF13456 - Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) | T. cacao v1.1 |
15591
|
scaffold_9: 3969581-3985171 | |
| Thecc1EG039866 | (1 of 131) PF00665 - Integrase core domain (rve) | T. cacao v1.1 |
2677
|
scaffold_9: 24137722-24140398 |
81 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Cucsa.235650.1 | C. sativus v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 1 | 5272 | Eudicot |
| Thecc1EG004724t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG004328t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG003331t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG012814t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG015097t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG034704t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG046095t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Thecc1EG011547t1 | T. cacao v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 29 | 5272 | Eudicot |
| Medtr0005s0260.1 | M. truncatula Mt4.0v1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 3 | 5272 | Eudicot |
| Medtr6g053050.1 | M. truncatula Mt4.0v1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 3 | 5272 | Eudicot |
| Kalax.2756s0001.1.p | K. laxiflora v1.1 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 1 | 5272 | Eudicot |
| Solyc07g032120.1.1 | S. lycopersicum ITAG2.4 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 1 | 5272 | Eudicot |
| AUR62042454-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62041262-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62026395-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62004820-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62002603-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62023936-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62038914-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62019688-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62033967-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62010807-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62036690-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62009200-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62002796-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62013824-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62025149-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62012056-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
| AUR62040125-RA | C. quinoa v1.0 | 122774912 | PTHR10178//PTHR10178:SF305 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | 31 | 5272 | Eudicot |
