Gene : Thecc1EG015097 T. cacao v1.1
Defline:  (1 of 131) PF00665 - Integrase core domain (rve) Genomic Order:  1723
Name:  ? Thecc1EG015097 Secondary Identifier:  ? PAC:27451174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015097 0.5kb upstream 0.5kb upstream 2084 true scaffold_3: 26205519-26207602 Theobroma cacao
Thecc1EG015097 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26205519-26206018 Theobroma cacao
Thecc1EG015097 0.5kb downstream 0.5kb downstream 2084 true scaffold_3: 26206019-26208102 Theobroma cacao
Thecc1EG015097 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26207603-26208102 Theobroma cacao
Thecc1EG015097 1.0kb upstream 1.0kb upstream 2584 true scaffold_3: 26205019-26207602 Theobroma cacao
Thecc1EG015097 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26205019-26206018 Theobroma cacao
Thecc1EG015097 1.0kb downstream 1.0kb downstream 2584 true scaffold_3: 26206019-26208602 Theobroma cacao
Thecc1EG015097 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26207603-26208602 Theobroma cacao
Thecc1EG015097 2.0kb upstream 2.0kb upstream 3584 true scaffold_3: 26204019-26207602 Theobroma cacao
Thecc1EG015097 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26204019-26206018 Theobroma cacao
Thecc1EG015097 2.0kb downstream 2.0kb downstream 3584 true scaffold_3: 26206019-26209602 Theobroma cacao
Thecc1EG015097 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26207603-26209602 Theobroma cacao
Thecc1EG015097 5.0kb upstream 5.0kb upstream 6584 true scaffold_3: 26201019-26207602 Theobroma cacao
Thecc1EG015097 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26201019-26206018 Theobroma cacao
Thecc1EG015097 5.0kb downstream 5.0kb downstream 6584 true scaffold_3: 26206019-26212602 Theobroma cacao
Thecc1EG015097 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26207603-26212602 Theobroma cacao
Thecc1EG015097 10.0kb upstream 10.0kb upstream 11584 true scaffold_3: 26196019-26207602 Theobroma cacao
Thecc1EG015097 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26196019-26206018 Theobroma cacao
Thecc1EG015097 10.0kb downstream 10.0kb downstream 11584 true scaffold_3: 26206019-26217602 Theobroma cacao
Thecc1EG015097 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26207603-26217602 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823550 5264 Brassicales-Malvales View MSA
124319627 5266 SBM View MSA
124168160 5268 Malvidae View MSA
124041100 5270 Rosid View MSA
123753005 5271 Pentapetalae View MSA
122774912 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain