Gene : Thecc1EG012620 T. cacao v1.1
Defline:  (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Genomic Order:  493
Name:  ? Thecc1EG012620 Secondary Identifier:  ? PAC:27447403
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012620 0.5kb upstream 0.5kb upstream 1564 true scaffold_3: 4325905-4327468 Theobroma cacao
Thecc1EG012620 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4325905-4326404 Theobroma cacao
Thecc1EG012620 0.5kb downstream 0.5kb downstream 1564 true scaffold_3: 4326405-4327968 Theobroma cacao
Thecc1EG012620 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4327469-4327968 Theobroma cacao
Thecc1EG012620 1.0kb upstream 1.0kb upstream 2064 true scaffold_3: 4325405-4327468 Theobroma cacao
Thecc1EG012620 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4325405-4326404 Theobroma cacao
Thecc1EG012620 1.0kb downstream 1.0kb downstream 2064 true scaffold_3: 4326405-4328468 Theobroma cacao
Thecc1EG012620 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4327469-4328468 Theobroma cacao
Thecc1EG012620 2.0kb upstream 2.0kb upstream 3064 true scaffold_3: 4324405-4327468 Theobroma cacao
Thecc1EG012620 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4324405-4326404 Theobroma cacao
Thecc1EG012620 2.0kb downstream 2.0kb downstream 3064 true scaffold_3: 4326405-4329468 Theobroma cacao
Thecc1EG012620 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4327469-4329468 Theobroma cacao
Thecc1EG012620 5.0kb upstream 5.0kb upstream 6064 true scaffold_3: 4321405-4327468 Theobroma cacao
Thecc1EG012620 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4321405-4326404 Theobroma cacao
Thecc1EG012620 5.0kb downstream 5.0kb downstream 6064 true scaffold_3: 4326405-4332468 Theobroma cacao
Thecc1EG012620 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4327469-4332468 Theobroma cacao
Thecc1EG012620 10.0kb upstream 10.0kb upstream 11064 true scaffold_3: 4316405-4327468 Theobroma cacao
Thecc1EG012620 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4316405-4326404 Theobroma cacao
Thecc1EG012620 10.0kb downstream 10.0kb downstream 11064 true scaffold_3: 4326405-4337468 Theobroma cacao
Thecc1EG012620 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4327469-4337468 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823914 5264 Brassicales-Malvales View MSA
124319967 5266 SBM View MSA
124168459 5268 Malvidae View MSA
124038207 5270 Rosid View MSA
123753005 5271 Pentapetalae View MSA
122774912 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain