Gene : Thecc1EG046298 T. cacao v1.1
Defline:  RNA-directed DNA polymerase (Reverse transcriptase) Genomic Order:  2
Name:  ? Thecc1EG046298 Secondary Identifier:  ? PAC:27441237
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046298 0.5kb upstream 0.5kb upstream 2114 true scaffold_230: 506-2619 Theobroma cacao
Thecc1EG046298 0.5kb upstream 0.5kb upstream 500 false scaffold_230: 506-1005 Theobroma cacao
Thecc1EG046298 0.5kb downstream 0.5kb downstream 2114 true scaffold_230: 1006-3119 Theobroma cacao
Thecc1EG046298 0.5kb downstream 0.5kb downstream 500 false scaffold_230: 2620-3119 Theobroma cacao
Thecc1EG046298 1.0kb upstream 1.0kb upstream 2614 true scaffold_230: 6-2619 Theobroma cacao
Thecc1EG046298 1.0kb upstream 1.0kb upstream 1000 false scaffold_230: 6-1005 Theobroma cacao
Thecc1EG046298 1.0kb downstream 1.0kb downstream 2614 true scaffold_230: 1006-3619 Theobroma cacao
Thecc1EG046298 1.0kb downstream 1.0kb downstream 1000 false scaffold_230: 2620-3619 Theobroma cacao
Thecc1EG046298 2.0kb upstream 2.0kb upstream 2619 true scaffold_230: 1-2619 Theobroma cacao
Thecc1EG046298 2.0kb upstream 2.0kb upstream 1005 false scaffold_230: 1-1005 Theobroma cacao
Thecc1EG046298 2.0kb downstream 2.0kb downstream 3614 true scaffold_230: 1006-4619 Theobroma cacao
Thecc1EG046298 2.0kb downstream 2.0kb downstream 2000 false scaffold_230: 2620-4619 Theobroma cacao
Thecc1EG046298 5.0kb upstream 5.0kb upstream 2619 true scaffold_230: 1-2619 Theobroma cacao
Thecc1EG046298 5.0kb upstream 5.0kb upstream 1005 false scaffold_230: 1-1005 Theobroma cacao
Thecc1EG046298 5.0kb downstream 5.0kb downstream 6614 true scaffold_230: 1006-7619 Theobroma cacao
Thecc1EG046298 5.0kb downstream 5.0kb downstream 5000 false scaffold_230: 2620-7619 Theobroma cacao
Thecc1EG046298 10.0kb upstream 10.0kb upstream 2619 true scaffold_230: 1-2619 Theobroma cacao
Thecc1EG046298 10.0kb upstream 10.0kb upstream 1005 false scaffold_230: 1-1005 Theobroma cacao
Thecc1EG046298 10.0kb downstream 10.0kb downstream 7480 true scaffold_230: 1006-8485 Theobroma cacao
Thecc1EG046298 10.0kb downstream 10.0kb downstream 5866 false scaffold_230: 2620-8485 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823783 5264 Brassicales-Malvales View MSA
124319839 5266 SBM View MSA
124168347 5268 Malvidae View MSA
124038123 5270 Rosid View MSA
123753005 5271 Pentapetalae View MSA
122774912 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain