Gene : Phvul.001G047700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22884//PTHR22884:SF351 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  482
Name:  ? Phvul.001G047700 Secondary Identifier:  ? PAC:37169102
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G047700 0.5kb upstream 0.5kb upstream 18770 true Chr01: 5001310-5020079 Phaseolus vulgaris
Phvul.001G047700 0.5kb upstream 0.5kb upstream 500 false Chr01: 5019580-5020079 Phaseolus vulgaris
Phvul.001G047700 0.5kb downstream 0.5kb downstream 18770 true Chr01: 5000810-5019579 Phaseolus vulgaris
Phvul.001G047700 0.5kb downstream 0.5kb downstream 500 false Chr01: 5000810-5001309 Phaseolus vulgaris
Phvul.001G047700 1.0kb upstream 1.0kb upstream 19270 true Chr01: 5001310-5020579 Phaseolus vulgaris
Phvul.001G047700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5019580-5020579 Phaseolus vulgaris
Phvul.001G047700 1.0kb downstream 1.0kb downstream 19270 true Chr01: 5000310-5019579 Phaseolus vulgaris
Phvul.001G047700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5000310-5001309 Phaseolus vulgaris
Phvul.001G047700 2.0kb upstream 2.0kb upstream 20270 true Chr01: 5001310-5021579 Phaseolus vulgaris
Phvul.001G047700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5019580-5021579 Phaseolus vulgaris
Phvul.001G047700 2.0kb downstream 2.0kb downstream 20270 true Chr01: 4999310-5019579 Phaseolus vulgaris
Phvul.001G047700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4999310-5001309 Phaseolus vulgaris
Phvul.001G047700 5.0kb upstream 5.0kb upstream 23270 true Chr01: 5001310-5024579 Phaseolus vulgaris
Phvul.001G047700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5019580-5024579 Phaseolus vulgaris
Phvul.001G047700 5.0kb downstream 5.0kb downstream 23270 true Chr01: 4996310-5019579 Phaseolus vulgaris
Phvul.001G047700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4996310-5001309 Phaseolus vulgaris
Phvul.001G047700 10.0kb upstream 10.0kb upstream 28270 true Chr01: 5001310-5029579 Phaseolus vulgaris
Phvul.001G047700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5019580-5029579 Phaseolus vulgaris
Phvul.001G047700 10.0kb downstream 10.0kb downstream 28270 true Chr01: 4991310-5019579 Phaseolus vulgaris
Phvul.001G047700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4991310-5001309 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299847 5265 Fabidae View MSA
124037398 5270 Rosid View MSA
123742870 5271 Pentapetalae View MSA
122794849 5272 Eudicot View MSA
122049261 5273 Angiosperm View MSA
121349718 5274 Embryophyte View MSA
123381414 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306746 0.0 1.21456 Low Low
cufflinks 1.64165 0.0 5.46191    
cufflinks 3.80499 0.0 13.9145    
cufflinks 0.350706 0.0 1.3627 Low Low
cufflinks 1.74909 0.0 6.75889    
cufflinks 3.64744 0.0 13.4146    
cufflinks 2.29075 0.0 9.16546    
cufflinks 2.36855 0.0 9.28701    
cufflinks 1.07868 0.0 5.25293    
cufflinks 5.11222 0.0 18.2516   High
cufflinks 1.14913 0.0 5.5833    

0 Strain