Gene : Phvul.001G172700 P. vulgaris v2.1
Defline:  (1 of 3) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Genomic Order:  1705
Name:  ? Phvul.001G172700 Secondary Identifier:  ? PAC:37170980
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G172700 0.5kb upstream 0.5kb upstream 3808 true Chr01: 42968744-42972551 Phaseolus vulgaris
Phvul.001G172700 0.5kb upstream 0.5kb upstream 500 false Chr01: 42968744-42969243 Phaseolus vulgaris
Phvul.001G172700 0.5kb downstream 0.5kb downstream 3808 true Chr01: 42969244-42973051 Phaseolus vulgaris
Phvul.001G172700 0.5kb downstream 0.5kb downstream 500 false Chr01: 42972552-42973051 Phaseolus vulgaris
Phvul.001G172700 1.0kb upstream 1.0kb upstream 4308 true Chr01: 42968244-42972551 Phaseolus vulgaris
Phvul.001G172700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42968244-42969243 Phaseolus vulgaris
Phvul.001G172700 1.0kb downstream 1.0kb downstream 4308 true Chr01: 42969244-42973551 Phaseolus vulgaris
Phvul.001G172700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42972552-42973551 Phaseolus vulgaris
Phvul.001G172700 2.0kb upstream 2.0kb upstream 5308 true Chr01: 42967244-42972551 Phaseolus vulgaris
Phvul.001G172700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42967244-42969243 Phaseolus vulgaris
Phvul.001G172700 2.0kb downstream 2.0kb downstream 5308 true Chr01: 42969244-42974551 Phaseolus vulgaris
Phvul.001G172700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42972552-42974551 Phaseolus vulgaris
Phvul.001G172700 5.0kb upstream 5.0kb upstream 8308 true Chr01: 42964244-42972551 Phaseolus vulgaris
Phvul.001G172700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42964244-42969243 Phaseolus vulgaris
Phvul.001G172700 5.0kb downstream 5.0kb downstream 8308 true Chr01: 42969244-42977551 Phaseolus vulgaris
Phvul.001G172700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42972552-42977551 Phaseolus vulgaris
Phvul.001G172700 10.0kb upstream 10.0kb upstream 13308 true Chr01: 42959244-42972551 Phaseolus vulgaris
Phvul.001G172700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42959244-42969243 Phaseolus vulgaris
Phvul.001G172700 10.0kb downstream 10.0kb downstream 13308 true Chr01: 42969244-42982551 Phaseolus vulgaris
Phvul.001G172700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42972552-42982551 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314387 5265 Fabidae View MSA
124062846 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.4644 0.0 111.792    
cufflinks 40.3938 0.0 146.546 High  
cufflinks 36.7532 0.0 136.066    
cufflinks 28.1087 0.0 99.0   Low
cufflinks 39.5034 0.0 133.209 High  
cufflinks 30.1055 0.0 100.936    
cufflinks 34.6189 0.0 128.381 High  
cufflinks 28.8229 0.0 96.4684 High Low
cufflinks 36.372 0.0 120.987 High  
cufflinks 55.6636 0.0 214.531 High High
cufflinks 34.6448 0.0 124.009 High  

0 Strain