Gene : Phvul.002G050700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  506
Name:  ? Phvul.002G050700 Secondary Identifier:  ? PAC:37178137
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G050700 0.5kb upstream 0.5kb upstream 4529 true Chr02: 4687867-4692395 Phaseolus vulgaris
Phvul.002G050700 0.5kb upstream 0.5kb upstream 500 false Chr02: 4691896-4692395 Phaseolus vulgaris
Phvul.002G050700 0.5kb downstream 0.5kb downstream 4529 true Chr02: 4687367-4691895 Phaseolus vulgaris
Phvul.002G050700 0.5kb downstream 0.5kb downstream 500 false Chr02: 4687367-4687866 Phaseolus vulgaris
Phvul.002G050700 1.0kb upstream 1.0kb upstream 5029 true Chr02: 4687867-4692895 Phaseolus vulgaris
Phvul.002G050700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4691896-4692895 Phaseolus vulgaris
Phvul.002G050700 1.0kb downstream 1.0kb downstream 5029 true Chr02: 4686867-4691895 Phaseolus vulgaris
Phvul.002G050700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4686867-4687866 Phaseolus vulgaris
Phvul.002G050700 2.0kb upstream 2.0kb upstream 6029 true Chr02: 4687867-4693895 Phaseolus vulgaris
Phvul.002G050700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4691896-4693895 Phaseolus vulgaris
Phvul.002G050700 2.0kb downstream 2.0kb downstream 6029 true Chr02: 4685867-4691895 Phaseolus vulgaris
Phvul.002G050700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4685867-4687866 Phaseolus vulgaris
Phvul.002G050700 5.0kb upstream 5.0kb upstream 9029 true Chr02: 4687867-4696895 Phaseolus vulgaris
Phvul.002G050700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4691896-4696895 Phaseolus vulgaris
Phvul.002G050700 5.0kb downstream 5.0kb downstream 9029 true Chr02: 4682867-4691895 Phaseolus vulgaris
Phvul.002G050700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4682867-4687866 Phaseolus vulgaris
Phvul.002G050700 10.0kb upstream 10.0kb upstream 14029 true Chr02: 4687867-4701895 Phaseolus vulgaris
Phvul.002G050700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4691896-4701895 Phaseolus vulgaris
Phvul.002G050700 10.0kb downstream 10.0kb downstream 14029 true Chr02: 4677867-4691895 Phaseolus vulgaris
Phvul.002G050700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4677867-4687866 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311033 5265 Fabidae View MSA
124067271 5270 Rosid View MSA
123738003 5271 Pentapetalae View MSA
122792522 5272 Eudicot View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.746525 0.0 2.60892    
cufflinks 1.76085 0.0 5.5945    
cufflinks 0.141913 0.0 0.571328 Low Low
cufflinks 0.788432 0.0 2.74552    
cufflinks 1.79572 0.0 5.70576    
cufflinks 0.335376 0.0 1.26158 Low  
cufflinks 0.326249 0.0 1.22986 Low  
cufflinks 0.582755 0.0 2.08973    
cufflinks 0.216338 0.0 0.842913 Low Low
cufflinks 5.03763 0.0 14.2631   High
cufflinks 1.51939 0.0 4.92235    

0 Strain