Gene : Phvul.002G175600 P. vulgaris v2.1
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  1735
Name:  ? Phvul.002G175600 Secondary Identifier:  ? PAC:37174746
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G175600 0.5kb upstream 0.5kb upstream 4944 true Chr02: 33376469-33381412 Phaseolus vulgaris
Phvul.002G175600 0.5kb upstream 0.5kb upstream 500 false Chr02: 33376469-33376968 Phaseolus vulgaris
Phvul.002G175600 0.5kb downstream 0.5kb downstream 4944 true Chr02: 33376969-33381912 Phaseolus vulgaris
Phvul.002G175600 0.5kb downstream 0.5kb downstream 500 false Chr02: 33381413-33381912 Phaseolus vulgaris
Phvul.002G175600 1.0kb upstream 1.0kb upstream 5444 true Chr02: 33375969-33381412 Phaseolus vulgaris
Phvul.002G175600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 33375969-33376968 Phaseolus vulgaris
Phvul.002G175600 1.0kb downstream 1.0kb downstream 5444 true Chr02: 33376969-33382412 Phaseolus vulgaris
Phvul.002G175600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 33381413-33382412 Phaseolus vulgaris
Phvul.002G175600 2.0kb upstream 2.0kb upstream 6444 true Chr02: 33374969-33381412 Phaseolus vulgaris
Phvul.002G175600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 33374969-33376968 Phaseolus vulgaris
Phvul.002G175600 2.0kb downstream 2.0kb downstream 6444 true Chr02: 33376969-33383412 Phaseolus vulgaris
Phvul.002G175600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 33381413-33383412 Phaseolus vulgaris
Phvul.002G175600 5.0kb upstream 5.0kb upstream 9444 true Chr02: 33371969-33381412 Phaseolus vulgaris
Phvul.002G175600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 33371969-33376968 Phaseolus vulgaris
Phvul.002G175600 5.0kb downstream 5.0kb downstream 9444 true Chr02: 33376969-33386412 Phaseolus vulgaris
Phvul.002G175600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 33381413-33386412 Phaseolus vulgaris
Phvul.002G175600 10.0kb upstream 10.0kb upstream 14444 true Chr02: 33366969-33381412 Phaseolus vulgaris
Phvul.002G175600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 33366969-33376968 Phaseolus vulgaris
Phvul.002G175600 10.0kb downstream 10.0kb downstream 14444 true Chr02: 33376969-33391412 Phaseolus vulgaris
Phvul.002G175600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 33381413-33391412 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299519 5265 Fabidae View MSA
124067938 5270 Rosid View MSA
123750273 5271 Pentapetalae View MSA
122773558 5272 Eudicot View MSA
122045832 5273 Angiosperm View MSA
121310512 5274 Embryophyte View MSA
123347975 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.20883 0.0 9.22211    
cufflinks 3.37121 0.0 9.65934    
cufflinks 2.34205 0.0 6.97956   Low
cufflinks 3.46347 0.0 9.94735    
cufflinks 5.75507 0.0 15.735   High
cufflinks 2.72211 0.0 7.97712   Low
cufflinks 5.04519 0.0 13.902    
cufflinks 3.96991 0.0 11.1623    
cufflinks 7.33087 0.0 19.6353   High
cufflinks 4.68381 0.0 13.0088    
cufflinks 5.15134 0.0 14.2136    

0 Strain