Gene : Phvul.002G194500 P. vulgaris v2.1
Defline:  (1 of 5) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  1926
Name:  ? Phvul.002G194500 Secondary Identifier:  ? PAC:37177607
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G194500 0.5kb upstream 0.5kb upstream 13851 true Chr02: 35833986-35847836 Phaseolus vulgaris
Phvul.002G194500 0.5kb upstream 0.5kb upstream 500 false Chr02: 35847337-35847836 Phaseolus vulgaris
Phvul.002G194500 0.5kb downstream 0.5kb downstream 13851 true Chr02: 35833486-35847336 Phaseolus vulgaris
Phvul.002G194500 0.5kb downstream 0.5kb downstream 500 false Chr02: 35833486-35833985 Phaseolus vulgaris
Phvul.002G194500 1.0kb upstream 1.0kb upstream 14351 true Chr02: 35833986-35848336 Phaseolus vulgaris
Phvul.002G194500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35847337-35848336 Phaseolus vulgaris
Phvul.002G194500 1.0kb downstream 1.0kb downstream 14351 true Chr02: 35832986-35847336 Phaseolus vulgaris
Phvul.002G194500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35832986-35833985 Phaseolus vulgaris
Phvul.002G194500 2.0kb upstream 2.0kb upstream 15351 true Chr02: 35833986-35849336 Phaseolus vulgaris
Phvul.002G194500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35847337-35849336 Phaseolus vulgaris
Phvul.002G194500 2.0kb downstream 2.0kb downstream 15351 true Chr02: 35831986-35847336 Phaseolus vulgaris
Phvul.002G194500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35831986-35833985 Phaseolus vulgaris
Phvul.002G194500 5.0kb upstream 5.0kb upstream 18351 true Chr02: 35833986-35852336 Phaseolus vulgaris
Phvul.002G194500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35847337-35852336 Phaseolus vulgaris
Phvul.002G194500 5.0kb downstream 5.0kb downstream 18351 true Chr02: 35828986-35847336 Phaseolus vulgaris
Phvul.002G194500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35828986-35833985 Phaseolus vulgaris
Phvul.002G194500 10.0kb upstream 10.0kb upstream 23351 true Chr02: 35833986-35857336 Phaseolus vulgaris
Phvul.002G194500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35847337-35857336 Phaseolus vulgaris
Phvul.002G194500 10.0kb downstream 10.0kb downstream 23351 true Chr02: 35823986-35847336 Phaseolus vulgaris
Phvul.002G194500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35823986-35833985 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314325 5265 Fabidae View MSA
124063626 5270 Rosid View MSA
123737447 5271 Pentapetalae View MSA
122788593 5272 Eudicot View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.43623 0.0 18.4047    
cufflinks 6.13712 0.0 17.6626    
cufflinks 6.91436 0.0 19.5864    
cufflinks 9.27822 0.0 25.7552   High
cufflinks 6.52409 0.0 18.7212    
cufflinks 6.35348 0.0 18.216    
cufflinks 5.57889 0.0 16.2508    
cufflinks 5.25383 0.0 15.3368   Low
cufflinks 4.95276 0.0 14.6556   Low
cufflinks 6.73513 0.0 19.1994    
cufflinks 6.32072 0.0 18.1977    

0 Strain