Gene : Phvul.003G014000 P. vulgaris v2.1
Defline:  (1 of 2) 1.11.1.7//3.1.3.2 - Peroxidase / Lactoperoxidase // Acid phosphatase / Phosphomonoesterase Genomic Order:  148
Name:  ? Phvul.003G014000 Secondary Identifier:  ? PAC:37147720
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5083 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6348 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6824 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7214 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7445 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G014000 0.5kb upstream 0.5kb upstream 4432 true Chr03: 1416226-1420657 Phaseolus vulgaris
Phvul.003G014000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1416226-1416725 Phaseolus vulgaris
Phvul.003G014000 0.5kb downstream 0.5kb downstream 4432 true Chr03: 1416726-1421157 Phaseolus vulgaris
Phvul.003G014000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1420658-1421157 Phaseolus vulgaris
Phvul.003G014000 1.0kb upstream 1.0kb upstream 4932 true Chr03: 1415726-1420657 Phaseolus vulgaris
Phvul.003G014000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1415726-1416725 Phaseolus vulgaris
Phvul.003G014000 1.0kb downstream 1.0kb downstream 4932 true Chr03: 1416726-1421657 Phaseolus vulgaris
Phvul.003G014000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1420658-1421657 Phaseolus vulgaris
Phvul.003G014000 2.0kb upstream 2.0kb upstream 5932 true Chr03: 1414726-1420657 Phaseolus vulgaris
Phvul.003G014000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1414726-1416725 Phaseolus vulgaris
Phvul.003G014000 2.0kb downstream 2.0kb downstream 5932 true Chr03: 1416726-1422657 Phaseolus vulgaris
Phvul.003G014000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1420658-1422657 Phaseolus vulgaris
Phvul.003G014000 5.0kb upstream 5.0kb upstream 8932 true Chr03: 1411726-1420657 Phaseolus vulgaris
Phvul.003G014000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1411726-1416725 Phaseolus vulgaris
Phvul.003G014000 5.0kb downstream 5.0kb downstream 8932 true Chr03: 1416726-1425657 Phaseolus vulgaris
Phvul.003G014000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1420658-1425657 Phaseolus vulgaris
Phvul.003G014000 10.0kb upstream 10.0kb upstream 13932 true Chr03: 1406726-1420657 Phaseolus vulgaris
Phvul.003G014000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1406726-1416725 Phaseolus vulgaris
Phvul.003G014000 10.0kb downstream 10.0kb downstream 13932 true Chr03: 1416726-1430657 Phaseolus vulgaris
Phvul.003G014000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1420658-1430657 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306633 5265 Fabidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.434735 0.0 1.71858    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0661902 0.0 0.316508 Low  
cufflinks 2.2826 0.0 9.38327   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0449666 0.0 0.2324 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain