Gene : Phvul.007G078100 P. vulgaris v2.1
Genomic Order:  789 Name:  ? Phvul.007G078100
Secondary Identifier:  ? PAC:37164931
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G078100 0.5kb upstream 0.5kb upstream 3681 true Chr07: 7484832-7488512 Phaseolus vulgaris
Phvul.007G078100 0.5kb upstream 0.5kb upstream 500 false Chr07: 7488013-7488512 Phaseolus vulgaris
Phvul.007G078100 0.5kb downstream 0.5kb downstream 3681 true Chr07: 7484332-7488012 Phaseolus vulgaris
Phvul.007G078100 0.5kb downstream 0.5kb downstream 500 false Chr07: 7484332-7484831 Phaseolus vulgaris
Phvul.007G078100 1.0kb upstream 1.0kb upstream 4181 true Chr07: 7484832-7489012 Phaseolus vulgaris
Phvul.007G078100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7488013-7489012 Phaseolus vulgaris
Phvul.007G078100 1.0kb downstream 1.0kb downstream 4181 true Chr07: 7483832-7488012 Phaseolus vulgaris
Phvul.007G078100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7483832-7484831 Phaseolus vulgaris
Phvul.007G078100 2.0kb upstream 2.0kb upstream 5181 true Chr07: 7484832-7490012 Phaseolus vulgaris
Phvul.007G078100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7488013-7490012 Phaseolus vulgaris
Phvul.007G078100 2.0kb downstream 2.0kb downstream 5181 true Chr07: 7482832-7488012 Phaseolus vulgaris
Phvul.007G078100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7482832-7484831 Phaseolus vulgaris
Phvul.007G078100 5.0kb upstream 5.0kb upstream 8181 true Chr07: 7484832-7493012 Phaseolus vulgaris
Phvul.007G078100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7488013-7493012 Phaseolus vulgaris
Phvul.007G078100 5.0kb downstream 5.0kb downstream 8181 true Chr07: 7479832-7488012 Phaseolus vulgaris
Phvul.007G078100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7479832-7484831 Phaseolus vulgaris
Phvul.007G078100 10.0kb upstream 10.0kb upstream 13181 true Chr07: 7484832-7498012 Phaseolus vulgaris
Phvul.007G078100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7488013-7498012 Phaseolus vulgaris
Phvul.007G078100 10.0kb downstream 10.0kb downstream 13181 true Chr07: 7474832-7488012 Phaseolus vulgaris
Phvul.007G078100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7474832-7484831 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314940 5265 Fabidae View MSA
124050819 5270 Rosid View MSA
123744340 5271 Pentapetalae View MSA
122794905 5272 Eudicot View MSA
122051166 5273 Angiosperm View MSA
121312323 5274 Embryophyte View MSA
123349506 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.649 0.0 5.49059   High
cufflinks 1.81943 0.0 5.99802   High
cufflinks 0.157738 0.0 0.646477 Low Low
cufflinks 1.07234 0.0 3.78237    
cufflinks 0.378407 0.0 1.46103 Low  
cufflinks 0.477581 0.0 1.79652 Low  
cufflinks 0.343808 0.0 1.33007 Low  
cufflinks 1.17098 0.0 4.03766    
cufflinks 0.0874357 0.0 0.379728 Low Low
cufflinks 0.458587 0.0 1.73486    
cufflinks 0.447428 0.0 1.7026 Low  

0 Strain