Gene : Phvul.007G028900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11544//PTHR11544:SF49 - COLD SHOCK DOMAIN CONTAINING PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  287
Name:  ? Phvul.007G028900 Secondary Identifier:  ? PAC:37165067
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G028900 0.5kb upstream 0.5kb upstream 701 true Chr07: 2285760-2286460 Phaseolus vulgaris
Phvul.007G028900 0.5kb upstream 0.5kb upstream 500 false Chr07: 2285961-2286460 Phaseolus vulgaris
Phvul.007G028900 0.5kb downstream 0.5kb downstream 701 true Chr07: 2285260-2285960 Phaseolus vulgaris
Phvul.007G028900 0.5kb downstream 0.5kb downstream 500 false Chr07: 2285260-2285759 Phaseolus vulgaris
Phvul.007G028900 1.0kb upstream 1.0kb upstream 1201 true Chr07: 2285760-2286960 Phaseolus vulgaris
Phvul.007G028900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2285961-2286960 Phaseolus vulgaris
Phvul.007G028900 1.0kb downstream 1.0kb downstream 1201 true Chr07: 2284760-2285960 Phaseolus vulgaris
Phvul.007G028900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2284760-2285759 Phaseolus vulgaris
Phvul.007G028900 2.0kb upstream 2.0kb upstream 2201 true Chr07: 2285760-2287960 Phaseolus vulgaris
Phvul.007G028900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2285961-2287960 Phaseolus vulgaris
Phvul.007G028900 2.0kb downstream 2.0kb downstream 2201 true Chr07: 2283760-2285960 Phaseolus vulgaris
Phvul.007G028900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2283760-2285759 Phaseolus vulgaris
Phvul.007G028900 5.0kb upstream 5.0kb upstream 5201 true Chr07: 2285760-2290960 Phaseolus vulgaris
Phvul.007G028900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2285961-2290960 Phaseolus vulgaris
Phvul.007G028900 5.0kb downstream 5.0kb downstream 5201 true Chr07: 2280760-2285960 Phaseolus vulgaris
Phvul.007G028900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2280760-2285759 Phaseolus vulgaris
Phvul.007G028900 10.0kb upstream 10.0kb upstream 10201 true Chr07: 2285760-2295960 Phaseolus vulgaris
Phvul.007G028900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2285961-2295960 Phaseolus vulgaris
Phvul.007G028900 10.0kb downstream 10.0kb downstream 10201 true Chr07: 2275760-2285960 Phaseolus vulgaris
Phvul.007G028900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2275760-2285759 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029141 5273 Angiosperm View MSA
122252311 5265 Fabidae Singleton cluster - no MSA
124051493 5270 Rosid View MSA
123753367 5271 Pentapetalae View MSA
122775077 5272 Eudicot View MSA
121298527 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain