Gene : Phvul.007G206800 P. vulgaris v2.1
Defline:  (1 of 2) K12120 - phytochrome A (PHYA) Genomic Order:  1925
Name:  ? Phvul.007G206800 Secondary Identifier:  ? PAC:37165897
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G206800 0.5kb upstream 0.5kb upstream 6099 true Chr07: 32946215-32952313 Phaseolus vulgaris
Phvul.007G206800 0.5kb upstream 0.5kb upstream 500 false Chr07: 32951814-32952313 Phaseolus vulgaris
Phvul.007G206800 0.5kb downstream 0.5kb downstream 6099 true Chr07: 32945715-32951813 Phaseolus vulgaris
Phvul.007G206800 0.5kb downstream 0.5kb downstream 500 false Chr07: 32945715-32946214 Phaseolus vulgaris
Phvul.007G206800 1.0kb upstream 1.0kb upstream 6599 true Chr07: 32946215-32952813 Phaseolus vulgaris
Phvul.007G206800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32951814-32952813 Phaseolus vulgaris
Phvul.007G206800 1.0kb downstream 1.0kb downstream 6599 true Chr07: 32945215-32951813 Phaseolus vulgaris
Phvul.007G206800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32945215-32946214 Phaseolus vulgaris
Phvul.007G206800 2.0kb upstream 2.0kb upstream 7599 true Chr07: 32946215-32953813 Phaseolus vulgaris
Phvul.007G206800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32951814-32953813 Phaseolus vulgaris
Phvul.007G206800 2.0kb downstream 2.0kb downstream 7599 true Chr07: 32944215-32951813 Phaseolus vulgaris
Phvul.007G206800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32944215-32946214 Phaseolus vulgaris
Phvul.007G206800 5.0kb upstream 5.0kb upstream 10599 true Chr07: 32946215-32956813 Phaseolus vulgaris
Phvul.007G206800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32951814-32956813 Phaseolus vulgaris
Phvul.007G206800 5.0kb downstream 5.0kb downstream 10599 true Chr07: 32941215-32951813 Phaseolus vulgaris
Phvul.007G206800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32941215-32946214 Phaseolus vulgaris
Phvul.007G206800 10.0kb upstream 10.0kb upstream 15599 true Chr07: 32946215-32961813 Phaseolus vulgaris
Phvul.007G206800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32951814-32961813 Phaseolus vulgaris
Phvul.007G206800 10.0kb downstream 10.0kb downstream 15599 true Chr07: 32936215-32951813 Phaseolus vulgaris
Phvul.007G206800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32936215-32946214 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299283 5265 Fabidae View MSA
124063137 5270 Rosid View MSA
123743412 5271 Pentapetalae View MSA
122786313 5272 Eudicot View MSA
122046553 5273 Angiosperm View MSA
121310619 5274 Embryophyte View MSA
123348057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.14888 0.0 19.3061   Low
cufflinks 6.68399 0.0 26.4008    
cufflinks 24.1636 0.0 99.8896    
cufflinks 4.94334 0.0 20.5972   Low
cufflinks 16.8134 0.0 65.323    
cufflinks 22.7064 0.0 92.522    
cufflinks 23.8264 0.0 97.6451    
cufflinks 11.7928 0.0 45.0197    
cufflinks 33.5279 0.0 146.881 High High
cufflinks 7.12273 0.0 28.2792    
cufflinks 14.9526 0.0 57.9356    

0 Strain