Gene : Phvul.007G196300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN Genomic Order:  1821
Name:  ? Phvul.007G196300 Secondary Identifier:  ? PAC:37164556
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G196300 0.5kb upstream 0.5kb upstream 7569 true Chr07: 31955076-31962644 Phaseolus vulgaris
Phvul.007G196300 0.5kb upstream 0.5kb upstream 500 false Chr07: 31962145-31962644 Phaseolus vulgaris
Phvul.007G196300 0.5kb downstream 0.5kb downstream 7569 true Chr07: 31954576-31962144 Phaseolus vulgaris
Phvul.007G196300 0.5kb downstream 0.5kb downstream 500 false Chr07: 31954576-31955075 Phaseolus vulgaris
Phvul.007G196300 1.0kb upstream 1.0kb upstream 8069 true Chr07: 31955076-31963144 Phaseolus vulgaris
Phvul.007G196300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31962145-31963144 Phaseolus vulgaris
Phvul.007G196300 1.0kb downstream 1.0kb downstream 8069 true Chr07: 31954076-31962144 Phaseolus vulgaris
Phvul.007G196300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31954076-31955075 Phaseolus vulgaris
Phvul.007G196300 2.0kb upstream 2.0kb upstream 9069 true Chr07: 31955076-31964144 Phaseolus vulgaris
Phvul.007G196300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31962145-31964144 Phaseolus vulgaris
Phvul.007G196300 2.0kb downstream 2.0kb downstream 9069 true Chr07: 31953076-31962144 Phaseolus vulgaris
Phvul.007G196300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31953076-31955075 Phaseolus vulgaris
Phvul.007G196300 5.0kb upstream 5.0kb upstream 12069 true Chr07: 31955076-31967144 Phaseolus vulgaris
Phvul.007G196300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31962145-31967144 Phaseolus vulgaris
Phvul.007G196300 5.0kb downstream 5.0kb downstream 12069 true Chr07: 31950076-31962144 Phaseolus vulgaris
Phvul.007G196300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31950076-31955075 Phaseolus vulgaris
Phvul.007G196300 10.0kb upstream 10.0kb upstream 17069 true Chr07: 31955076-31972144 Phaseolus vulgaris
Phvul.007G196300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31962145-31972144 Phaseolus vulgaris
Phvul.007G196300 10.0kb downstream 10.0kb downstream 17069 true Chr07: 31945076-31962144 Phaseolus vulgaris
Phvul.007G196300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31945076-31955075 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300928 5265 Fabidae View MSA
124066315 5270 Rosid View MSA
123739621 5271 Pentapetalae View MSA
122793183 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.03954 0.0 20.8915   Low
cufflinks 11.5815 0.0 39.4001    
cufflinks 14.5422 0.0 49.9981    
cufflinks 5.34646 0.0 17.0687   Low
cufflinks 11.1736 0.0 36.901    
cufflinks 14.1601 0.0 52.1384    
cufflinks 14.0221 0.0 44.9921    
cufflinks 11.0717 0.0 35.5032    
cufflinks 12.9876 0.0 41.5827    
cufflinks 23.2522 0.0 81.4735   High
cufflinks 11.369 0.0 37.3788    

0 Strain