Gene : Phvul.009G044500 P. vulgaris v2.1
Defline:  (1 of 8) K15601 - lysine-specific demethylase 3 [EC:1.14.11.-] (KDM3) Genomic Order:  446
Name:  ? Phvul.009G044500 Secondary Identifier:  ? PAC:37151559
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G044500 0.5kb upstream 0.5kb upstream 4785 true Chr09: 8859465-8864249 Phaseolus vulgaris
Phvul.009G044500 0.5kb upstream 0.5kb upstream 500 false Chr09: 8859465-8859964 Phaseolus vulgaris
Phvul.009G044500 0.5kb downstream 0.5kb downstream 4785 true Chr09: 8859965-8864749 Phaseolus vulgaris
Phvul.009G044500 0.5kb downstream 0.5kb downstream 500 false Chr09: 8864250-8864749 Phaseolus vulgaris
Phvul.009G044500 1.0kb upstream 1.0kb upstream 5285 true Chr09: 8858965-8864249 Phaseolus vulgaris
Phvul.009G044500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8858965-8859964 Phaseolus vulgaris
Phvul.009G044500 1.0kb downstream 1.0kb downstream 5285 true Chr09: 8859965-8865249 Phaseolus vulgaris
Phvul.009G044500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8864250-8865249 Phaseolus vulgaris
Phvul.009G044500 2.0kb upstream 2.0kb upstream 6285 true Chr09: 8857965-8864249 Phaseolus vulgaris
Phvul.009G044500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8857965-8859964 Phaseolus vulgaris
Phvul.009G044500 2.0kb downstream 2.0kb downstream 6285 true Chr09: 8859965-8866249 Phaseolus vulgaris
Phvul.009G044500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8864250-8866249 Phaseolus vulgaris
Phvul.009G044500 5.0kb upstream 5.0kb upstream 9285 true Chr09: 8854965-8864249 Phaseolus vulgaris
Phvul.009G044500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8854965-8859964 Phaseolus vulgaris
Phvul.009G044500 5.0kb downstream 5.0kb downstream 9285 true Chr09: 8859965-8869249 Phaseolus vulgaris
Phvul.009G044500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8864250-8869249 Phaseolus vulgaris
Phvul.009G044500 10.0kb upstream 10.0kb upstream 14285 true Chr09: 8849965-8864249 Phaseolus vulgaris
Phvul.009G044500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8849965-8859964 Phaseolus vulgaris
Phvul.009G044500 10.0kb downstream 10.0kb downstream 14285 true Chr09: 8859965-8874249 Phaseolus vulgaris
Phvul.009G044500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8864250-8874249 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302562 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0944288 0.0 0.382414 Low  
cufflinks 0.022954 0.0 0.106222 Low Low
cufflinks 0.227683 0.0 0.860064 Low  
cufflinks 0.0731907 0.0 0.305344 Low  
cufflinks 0.131396 0.0 0.522702 Low  
cufflinks 0.511341 0.0 1.80071 Low High
cufflinks 0.0803834 0.0 0.330142 Low  
cufflinks 0.207552 0.0 0.787445 Low  
cufflinks 0.148217 0.0 0.581076 Low  
cufflinks 0.152028 0.0 0.594742 Low  
cufflinks 0.063577 0.0 0.267814 Low  

0 Strain