Gene : Phvul.009G155300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10857//PTHR10857:SF18 - COPINE // SUBFAMILY NOT NAMED Genomic Order:  1593
Name:  ? Phvul.009G155300 Secondary Identifier:  ? PAC:37148929
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G155300 0.5kb upstream 0.5kb upstream 7361 true Chr09: 23042356-23049716 Phaseolus vulgaris
Phvul.009G155300 0.5kb upstream 0.5kb upstream 500 false Chr09: 23049217-23049716 Phaseolus vulgaris
Phvul.009G155300 0.5kb downstream 0.5kb downstream 7361 true Chr09: 23041856-23049216 Phaseolus vulgaris
Phvul.009G155300 0.5kb downstream 0.5kb downstream 500 false Chr09: 23041856-23042355 Phaseolus vulgaris
Phvul.009G155300 1.0kb upstream 1.0kb upstream 7861 true Chr09: 23042356-23050216 Phaseolus vulgaris
Phvul.009G155300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23049217-23050216 Phaseolus vulgaris
Phvul.009G155300 1.0kb downstream 1.0kb downstream 7861 true Chr09: 23041356-23049216 Phaseolus vulgaris
Phvul.009G155300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23041356-23042355 Phaseolus vulgaris
Phvul.009G155300 2.0kb upstream 2.0kb upstream 8861 true Chr09: 23042356-23051216 Phaseolus vulgaris
Phvul.009G155300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23049217-23051216 Phaseolus vulgaris
Phvul.009G155300 2.0kb downstream 2.0kb downstream 8861 true Chr09: 23040356-23049216 Phaseolus vulgaris
Phvul.009G155300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23040356-23042355 Phaseolus vulgaris
Phvul.009G155300 5.0kb upstream 5.0kb upstream 11861 true Chr09: 23042356-23054216 Phaseolus vulgaris
Phvul.009G155300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23049217-23054216 Phaseolus vulgaris
Phvul.009G155300 5.0kb downstream 5.0kb downstream 11861 true Chr09: 23037356-23049216 Phaseolus vulgaris
Phvul.009G155300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23037356-23042355 Phaseolus vulgaris
Phvul.009G155300 10.0kb upstream 10.0kb upstream 16861 true Chr09: 23042356-23059216 Phaseolus vulgaris
Phvul.009G155300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23049217-23059216 Phaseolus vulgaris
Phvul.009G155300 10.0kb downstream 10.0kb downstream 16861 true Chr09: 23032356-23049216 Phaseolus vulgaris
Phvul.009G155300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23032356-23042355 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314443 5265 Fabidae View MSA
124066456 5270 Rosid View MSA
123739278 5271 Pentapetalae View MSA
122792027 5272 Eudicot View MSA
122050379 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.5831 0.0 77.0   High
cufflinks 5.56731 0.0 20.8231    
cufflinks 5.29525 0.0 21.6731   Low
cufflinks 6.72159 0.0 26.167    
cufflinks 7.78982 0.0 29.5956    
cufflinks 5.17925 0.0 21.3331   Low
cufflinks 9.01198 0.0 32.7915    
cufflinks 7.7592 0.0 30.3473    
cufflinks 9.84642 0.0 35.2489    
cufflinks 20.444 0.0 74.131   High
cufflinks 9.4799 0.0 38.2813    

0 Strain