Gene : Phvul.009G149100 P. vulgaris v2.1
Defline:  (1 of 45) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1535
Name:  ? Phvul.009G149100 Secondary Identifier:  ? PAC:37150509
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G149100 0.5kb upstream 0.5kb upstream 9695 true Chr09: 22245929-22255623 Phaseolus vulgaris
Phvul.009G149100 0.5kb upstream 0.5kb upstream 500 false Chr09: 22245929-22246428 Phaseolus vulgaris
Phvul.009G149100 0.5kb downstream 0.5kb downstream 9695 true Chr09: 22246429-22256123 Phaseolus vulgaris
Phvul.009G149100 0.5kb downstream 0.5kb downstream 500 false Chr09: 22255624-22256123 Phaseolus vulgaris
Phvul.009G149100 1.0kb upstream 1.0kb upstream 10195 true Chr09: 22245429-22255623 Phaseolus vulgaris
Phvul.009G149100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22245429-22246428 Phaseolus vulgaris
Phvul.009G149100 1.0kb downstream 1.0kb downstream 10195 true Chr09: 22246429-22256623 Phaseolus vulgaris
Phvul.009G149100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22255624-22256623 Phaseolus vulgaris
Phvul.009G149100 2.0kb upstream 2.0kb upstream 11195 true Chr09: 22244429-22255623 Phaseolus vulgaris
Phvul.009G149100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22244429-22246428 Phaseolus vulgaris
Phvul.009G149100 2.0kb downstream 2.0kb downstream 11195 true Chr09: 22246429-22257623 Phaseolus vulgaris
Phvul.009G149100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22255624-22257623 Phaseolus vulgaris
Phvul.009G149100 5.0kb upstream 5.0kb upstream 14195 true Chr09: 22241429-22255623 Phaseolus vulgaris
Phvul.009G149100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22241429-22246428 Phaseolus vulgaris
Phvul.009G149100 5.0kb downstream 5.0kb downstream 14195 true Chr09: 22246429-22260623 Phaseolus vulgaris
Phvul.009G149100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22255624-22260623 Phaseolus vulgaris
Phvul.009G149100 10.0kb upstream 10.0kb upstream 19195 true Chr09: 22236429-22255623 Phaseolus vulgaris
Phvul.009G149100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22236429-22246428 Phaseolus vulgaris
Phvul.009G149100 10.0kb downstream 10.0kb downstream 19195 true Chr09: 22246429-22265623 Phaseolus vulgaris
Phvul.009G149100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22255624-22265623 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311130 5265 Fabidae View MSA
124063486 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.78838 0.0 12.8961   Low
cufflinks 8.59232 0.0 22.3375    
cufflinks 14.2398 0.0 36.8502   High
cufflinks 4.31139 0.0 11.815   Low
cufflinks 8.71081 0.0 22.7035    
cufflinks 11.0889 0.0 28.6754    
cufflinks 10.4282 0.0 26.9758    
cufflinks 9.04476 0.0 23.4357    
cufflinks 9.46686 0.0 24.5386    
cufflinks 13.2302 0.0 34.2015   High
cufflinks 8.28636 0.0 21.6106    

0 Strain