Gene : Phvul.009G097700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF Genomic Order:  1009
Name:  ? Phvul.009G097700 Secondary Identifier:  ? PAC:37149165
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G097700 0.5kb upstream 0.5kb upstream 7065 true Chr09: 15448232-15455296 Phaseolus vulgaris
Phvul.009G097700 0.5kb upstream 0.5kb upstream 500 false Chr09: 15448232-15448731 Phaseolus vulgaris
Phvul.009G097700 0.5kb downstream 0.5kb downstream 7065 true Chr09: 15448732-15455796 Phaseolus vulgaris
Phvul.009G097700 0.5kb downstream 0.5kb downstream 500 false Chr09: 15455297-15455796 Phaseolus vulgaris
Phvul.009G097700 1.0kb upstream 1.0kb upstream 7565 true Chr09: 15447732-15455296 Phaseolus vulgaris
Phvul.009G097700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 15447732-15448731 Phaseolus vulgaris
Phvul.009G097700 1.0kb downstream 1.0kb downstream 7565 true Chr09: 15448732-15456296 Phaseolus vulgaris
Phvul.009G097700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 15455297-15456296 Phaseolus vulgaris
Phvul.009G097700 2.0kb upstream 2.0kb upstream 8565 true Chr09: 15446732-15455296 Phaseolus vulgaris
Phvul.009G097700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 15446732-15448731 Phaseolus vulgaris
Phvul.009G097700 2.0kb downstream 2.0kb downstream 8565 true Chr09: 15448732-15457296 Phaseolus vulgaris
Phvul.009G097700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 15455297-15457296 Phaseolus vulgaris
Phvul.009G097700 5.0kb upstream 5.0kb upstream 11565 true Chr09: 15443732-15455296 Phaseolus vulgaris
Phvul.009G097700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 15443732-15448731 Phaseolus vulgaris
Phvul.009G097700 5.0kb downstream 5.0kb downstream 11565 true Chr09: 15448732-15460296 Phaseolus vulgaris
Phvul.009G097700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 15455297-15460296 Phaseolus vulgaris
Phvul.009G097700 10.0kb upstream 10.0kb upstream 16565 true Chr09: 15438732-15455296 Phaseolus vulgaris
Phvul.009G097700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 15438732-15448731 Phaseolus vulgaris
Phvul.009G097700 10.0kb downstream 10.0kb downstream 16565 true Chr09: 15448732-15465296 Phaseolus vulgaris
Phvul.009G097700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 15455297-15465296 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308556 5265 Fabidae View MSA
124063305 5270 Rosid View MSA
123742166 5271 Pentapetalae View MSA
122788030 5272 Eudicot View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.66957 0.0 14.8625   Low
cufflinks 13.3637 0.0 34.6867    
cufflinks 15.19 0.0 39.6246    
cufflinks 4.95943 0.0 13.1404   Low
cufflinks 12.5171 0.0 32.3967    
cufflinks 18.9037 0.0 49.8632   High
cufflinks 12.0095 0.0 31.1199    
cufflinks 13.0983 0.0 34.0378    
cufflinks 12.0777 0.0 31.2883    
cufflinks 18.282 0.0 48.0493   High
cufflinks 10.562 0.0 27.3014    

0 Strain