Gene : Phvul.009G259650 P. vulgaris v2.1
Defline:  (1 of 3) K12133 - MYB-related transcription factor LHY (LHY) Genomic Order:  2656
Name:  ? Phvul.009G259650 Secondary Identifier:  ? PAC:37151729
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G259650 0.5kb upstream 0.5kb upstream 20696 true Chr09: 37962514-37983209 Phaseolus vulgaris
Phvul.009G259650 0.5kb upstream 0.5kb upstream 500 false Chr09: 37962514-37963013 Phaseolus vulgaris
Phvul.009G259650 0.5kb downstream 0.5kb downstream 20696 true Chr09: 37963014-37983709 Phaseolus vulgaris
Phvul.009G259650 0.5kb downstream 0.5kb downstream 500 false Chr09: 37983210-37983709 Phaseolus vulgaris
Phvul.009G259650 1.0kb upstream 1.0kb upstream 21196 true Chr09: 37962014-37983209 Phaseolus vulgaris
Phvul.009G259650 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37962014-37963013 Phaseolus vulgaris
Phvul.009G259650 1.0kb downstream 1.0kb downstream 21196 true Chr09: 37963014-37984209 Phaseolus vulgaris
Phvul.009G259650 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37983210-37984209 Phaseolus vulgaris
Phvul.009G259650 2.0kb upstream 2.0kb upstream 22196 true Chr09: 37961014-37983209 Phaseolus vulgaris
Phvul.009G259650 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37961014-37963013 Phaseolus vulgaris
Phvul.009G259650 2.0kb downstream 2.0kb downstream 22196 true Chr09: 37963014-37985209 Phaseolus vulgaris
Phvul.009G259650 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37983210-37985209 Phaseolus vulgaris
Phvul.009G259650 5.0kb upstream 5.0kb upstream 25196 true Chr09: 37958014-37983209 Phaseolus vulgaris
Phvul.009G259650 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37958014-37963013 Phaseolus vulgaris
Phvul.009G259650 5.0kb downstream 5.0kb downstream 25196 true Chr09: 37963014-37988209 Phaseolus vulgaris
Phvul.009G259650 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37983210-37988209 Phaseolus vulgaris
Phvul.009G259650 10.0kb upstream 10.0kb upstream 30196 true Chr09: 37953014-37983209 Phaseolus vulgaris
Phvul.009G259650 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37953014-37963013 Phaseolus vulgaris
Phvul.009G259650 10.0kb downstream 10.0kb downstream 30196 true Chr09: 37963014-37993209 Phaseolus vulgaris
Phvul.009G259650 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37983210-37993209 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311594 5265 Fabidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.96378 0.0 18.0778    
cufflinks 4.6183 0.0 17.1243    
cufflinks 21.9855 0.0 78.0182   High
cufflinks 2.03382 0.0 8.08679   Low
cufflinks 11.9171 0.0 38.6038    
cufflinks 13.5618 0.0 47.7988   High
cufflinks 3.68763 0.0 14.383    
cufflinks 1.51714 0.0 6.33849   Low
cufflinks 2.96504 0.0 10.3283    
cufflinks 5.33079 0.0 21.6149    
cufflinks 11.902 0.0 38.9759    

0 Strain