Gene : Phvul.011G072500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Genomic Order:  746
Name:  ? Phvul.011G072500 Secondary Identifier:  ? PAC:37157083
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G072500 0.5kb upstream 0.5kb upstream 24616 true Chr11: 6678544-6703159 Phaseolus vulgaris
Phvul.011G072500 0.5kb upstream 0.5kb upstream 500 false Chr11: 6678544-6679043 Phaseolus vulgaris
Phvul.011G072500 0.5kb downstream 0.5kb downstream 24616 true Chr11: 6679044-6703659 Phaseolus vulgaris
Phvul.011G072500 0.5kb downstream 0.5kb downstream 500 false Chr11: 6703160-6703659 Phaseolus vulgaris
Phvul.011G072500 1.0kb upstream 1.0kb upstream 25116 true Chr11: 6678044-6703159 Phaseolus vulgaris
Phvul.011G072500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6678044-6679043 Phaseolus vulgaris
Phvul.011G072500 1.0kb downstream 1.0kb downstream 25116 true Chr11: 6679044-6704159 Phaseolus vulgaris
Phvul.011G072500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6703160-6704159 Phaseolus vulgaris
Phvul.011G072500 2.0kb upstream 2.0kb upstream 26116 true Chr11: 6677044-6703159 Phaseolus vulgaris
Phvul.011G072500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6677044-6679043 Phaseolus vulgaris
Phvul.011G072500 2.0kb downstream 2.0kb downstream 26116 true Chr11: 6679044-6705159 Phaseolus vulgaris
Phvul.011G072500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6703160-6705159 Phaseolus vulgaris
Phvul.011G072500 5.0kb upstream 5.0kb upstream 29116 true Chr11: 6674044-6703159 Phaseolus vulgaris
Phvul.011G072500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6674044-6679043 Phaseolus vulgaris
Phvul.011G072500 5.0kb downstream 5.0kb downstream 29116 true Chr11: 6679044-6708159 Phaseolus vulgaris
Phvul.011G072500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6703160-6708159 Phaseolus vulgaris
Phvul.011G072500 10.0kb upstream 10.0kb upstream 34116 true Chr11: 6669044-6703159 Phaseolus vulgaris
Phvul.011G072500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6669044-6679043 Phaseolus vulgaris
Phvul.011G072500 10.0kb downstream 10.0kb downstream 34116 true Chr11: 6679044-6713159 Phaseolus vulgaris
Phvul.011G072500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6703160-6713159 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306506 5265 Fabidae View MSA
124065775 5270 Rosid View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23116 0.0 3.73988   Low
cufflinks 2.44891 0.0 6.91062    
cufflinks 2.79118 0.0 7.77799    
cufflinks 1.77786 0.0 5.22355   Low
cufflinks 2.53984 0.0 7.19097    
cufflinks 3.28766 0.0 9.02945    
cufflinks 4.15716 0.0 11.1919    
cufflinks 4.89344 0.0 12.9824   High
cufflinks 3.47188 0.0 9.50326    
cufflinks 6.90299 0.0 18.009   High
cufflinks 2.13393 0.0 6.12894    

0 Strain