Gene : Phvul.011G031500 P. vulgaris v2.1
Defline:  (1 of 1) K12824 - transcription elongation regulator 1 (TCERG1, CA150) Genomic Order:  331
Name:  ? Phvul.011G031500 Secondary Identifier:  ? PAC:37154679
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G031500 0.5kb upstream 0.5kb upstream 14082 true Chr11: 2905445-2919526 Phaseolus vulgaris
Phvul.011G031500 0.5kb upstream 0.5kb upstream 500 false Chr11: 2919027-2919526 Phaseolus vulgaris
Phvul.011G031500 0.5kb downstream 0.5kb downstream 14082 true Chr11: 2904945-2919026 Phaseolus vulgaris
Phvul.011G031500 0.5kb downstream 0.5kb downstream 500 false Chr11: 2904945-2905444 Phaseolus vulgaris
Phvul.011G031500 1.0kb upstream 1.0kb upstream 14582 true Chr11: 2905445-2920026 Phaseolus vulgaris
Phvul.011G031500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2919027-2920026 Phaseolus vulgaris
Phvul.011G031500 1.0kb downstream 1.0kb downstream 14582 true Chr11: 2904445-2919026 Phaseolus vulgaris
Phvul.011G031500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2904445-2905444 Phaseolus vulgaris
Phvul.011G031500 2.0kb upstream 2.0kb upstream 15582 true Chr11: 2905445-2921026 Phaseolus vulgaris
Phvul.011G031500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2919027-2921026 Phaseolus vulgaris
Phvul.011G031500 2.0kb downstream 2.0kb downstream 15582 true Chr11: 2903445-2919026 Phaseolus vulgaris
Phvul.011G031500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2903445-2905444 Phaseolus vulgaris
Phvul.011G031500 5.0kb upstream 5.0kb upstream 18582 true Chr11: 2905445-2924026 Phaseolus vulgaris
Phvul.011G031500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2919027-2924026 Phaseolus vulgaris
Phvul.011G031500 5.0kb downstream 5.0kb downstream 18582 true Chr11: 2900445-2919026 Phaseolus vulgaris
Phvul.011G031500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2900445-2905444 Phaseolus vulgaris
Phvul.011G031500 10.0kb upstream 10.0kb upstream 23582 true Chr11: 2905445-2929026 Phaseolus vulgaris
Phvul.011G031500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2919027-2929026 Phaseolus vulgaris
Phvul.011G031500 10.0kb downstream 10.0kb downstream 23582 true Chr11: 2895445-2919026 Phaseolus vulgaris
Phvul.011G031500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2895445-2905444 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304823 5265 Fabidae View MSA
124068165 5270 Rosid View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.40015 0.0 9.49704   Low
cufflinks 8.78454 0.0 22.8954    
cufflinks 10.979 0.0 28.4258    
cufflinks 3.33334 0.0 9.36113   Low
cufflinks 7.97972 0.0 20.9514    
cufflinks 10.677 0.0 27.6573    
cufflinks 11.3889 0.0 29.4653    
cufflinks 10.5357 0.0 27.2807    
cufflinks 10.5268 0.0 27.2756    
cufflinks 10.659 0.0 27.6234    
cufflinks 7.0568 0.0 18.6445    

0 Strain