Gene : Phvul.011G215800 P. vulgaris v2.1
Defline:  (1 of 1) K15027 - translation initiation factor 2D (EIF2D) Genomic Order:  2150
Name:  ? Phvul.011G215800 Secondary Identifier:  ? PAC:37156213
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G215800 0.5kb upstream 0.5kb upstream 5933 true Chr11: 53485896-53491828 Phaseolus vulgaris
Phvul.011G215800 0.5kb upstream 0.5kb upstream 500 false Chr11: 53491329-53491828 Phaseolus vulgaris
Phvul.011G215800 0.5kb downstream 0.5kb downstream 5933 true Chr11: 53485396-53491328 Phaseolus vulgaris
Phvul.011G215800 0.5kb downstream 0.5kb downstream 500 false Chr11: 53485396-53485895 Phaseolus vulgaris
Phvul.011G215800 1.0kb upstream 1.0kb upstream 6433 true Chr11: 53485896-53492328 Phaseolus vulgaris
Phvul.011G215800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 53491329-53492328 Phaseolus vulgaris
Phvul.011G215800 1.0kb downstream 1.0kb downstream 6433 true Chr11: 53484896-53491328 Phaseolus vulgaris
Phvul.011G215800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 53484896-53485895 Phaseolus vulgaris
Phvul.011G215800 2.0kb upstream 2.0kb upstream 7433 true Chr11: 53485896-53493328 Phaseolus vulgaris
Phvul.011G215800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 53491329-53493328 Phaseolus vulgaris
Phvul.011G215800 2.0kb downstream 2.0kb downstream 7433 true Chr11: 53483896-53491328 Phaseolus vulgaris
Phvul.011G215800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 53483896-53485895 Phaseolus vulgaris
Phvul.011G215800 5.0kb upstream 5.0kb upstream 10433 true Chr11: 53485896-53496328 Phaseolus vulgaris
Phvul.011G215800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 53491329-53496328 Phaseolus vulgaris
Phvul.011G215800 5.0kb downstream 5.0kb downstream 10433 true Chr11: 53480896-53491328 Phaseolus vulgaris
Phvul.011G215800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 53480896-53485895 Phaseolus vulgaris
Phvul.011G215800 10.0kb upstream 10.0kb upstream 15433 true Chr11: 53485896-53501328 Phaseolus vulgaris
Phvul.011G215800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 53491329-53501328 Phaseolus vulgaris
Phvul.011G215800 10.0kb downstream 10.0kb downstream 15433 true Chr11: 53475896-53491328 Phaseolus vulgaris
Phvul.011G215800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 53475896-53485895 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041515 5273 Angiosperm View MSA
122305235 5265 Fabidae View MSA
124063862 5270 Rosid View MSA
123737904 5271 Pentapetalae View MSA
122786176 5272 Eudicot View MSA
121347053 5274 Embryophyte View MSA
123424674 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.48102 0.0 15.0594    
cufflinks 6.36127 0.0 17.2627   High
cufflinks 5.37093 0.0 14.7601    
cufflinks 4.05798 0.0 11.5303   Low
cufflinks 4.40601 0.0 12.4004    
cufflinks 5.57318 0.0 15.2863    
cufflinks 4.47505 0.0 12.5078    
cufflinks 4.70197 0.0 13.0485    
cufflinks 5.15618 0.0 14.2545    
cufflinks 7.89234 0.0 21.0517   High
cufflinks 5.4586 0.0 15.0386    

0 Strain