Gene : Zm00008a039088 Z. mays PH207 v1.1
Defline:  (1 of 8) PF00078//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) Genomic Order:  149
Name:  ? Zm00008a039088 Secondary Identifier:  ? PAC:37215674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a039088 0.5kb upstream 0.5kb upstream 2882 true chrUNKNOWN: 1354888-1357769 Zea mays PH207
Zm00008a039088 0.5kb upstream 0.5kb upstream 500 false chrUNKNOWN: 1354888-1355387 Zea mays PH207
Zm00008a039088 0.5kb downstream 0.5kb downstream 2882 true chrUNKNOWN: 1355388-1358269 Zea mays PH207
Zm00008a039088 0.5kb downstream 0.5kb downstream 500 false chrUNKNOWN: 1357770-1358269 Zea mays PH207
Zm00008a039088 1.0kb upstream 1.0kb upstream 3382 true chrUNKNOWN: 1354388-1357769 Zea mays PH207
Zm00008a039088 1.0kb upstream 1.0kb upstream 1000 false chrUNKNOWN: 1354388-1355387 Zea mays PH207
Zm00008a039088 1.0kb downstream 1.0kb downstream 3382 true chrUNKNOWN: 1355388-1358769 Zea mays PH207
Zm00008a039088 1.0kb downstream 1.0kb downstream 1000 false chrUNKNOWN: 1357770-1358769 Zea mays PH207
Zm00008a039088 2.0kb upstream 2.0kb upstream 4382 true chrUNKNOWN: 1353388-1357769 Zea mays PH207
Zm00008a039088 2.0kb upstream 2.0kb upstream 2000 false chrUNKNOWN: 1353388-1355387 Zea mays PH207
Zm00008a039088 2.0kb downstream 2.0kb downstream 4382 true chrUNKNOWN: 1355388-1359769 Zea mays PH207
Zm00008a039088 2.0kb downstream 2.0kb downstream 2000 false chrUNKNOWN: 1357770-1359769 Zea mays PH207
Zm00008a039088 5.0kb upstream 5.0kb upstream 7382 true chrUNKNOWN: 1350388-1357769 Zea mays PH207
Zm00008a039088 5.0kb upstream 5.0kb upstream 5000 false chrUNKNOWN: 1350388-1355387 Zea mays PH207
Zm00008a039088 5.0kb downstream 5.0kb downstream 7382 true chrUNKNOWN: 1355388-1362769 Zea mays PH207
Zm00008a039088 5.0kb downstream 5.0kb downstream 5000 false chrUNKNOWN: 1357770-1362769 Zea mays PH207
Zm00008a039088 10.0kb upstream 10.0kb upstream 12382 true chrUNKNOWN: 1345388-1357769 Zea mays PH207
Zm00008a039088 10.0kb upstream 10.0kb upstream 10000 false chrUNKNOWN: 1345388-1355387 Zea mays PH207
Zm00008a039088 10.0kb downstream 10.0kb downstream 12382 true chrUNKNOWN: 1355388-1367769 Zea mays PH207
Zm00008a039088 10.0kb downstream 10.0kb downstream 10000 false chrUNKNOWN: 1357770-1367769 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194347 5267 Panicoideae View MSA
124466691 5269 Grass View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier