Gene : Potri.001G289700 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  2999
Name:  ? Potri.001G289700 Secondary Identifier:  ? PAC:37278085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G289700 0.5kb upstream 0.5kb upstream 5116 true Chr01: 29549980-29555095 Populus trichocarpa
Potri.001G289700 0.5kb upstream 0.5kb upstream 500 false Chr01: 29554596-29555095 Populus trichocarpa
Potri.001G289700 0.5kb downstream 0.5kb downstream 5116 true Chr01: 29549480-29554595 Populus trichocarpa
Potri.001G289700 0.5kb downstream 0.5kb downstream 500 false Chr01: 29549480-29549979 Populus trichocarpa
Potri.001G289700 1.0kb upstream 1.0kb upstream 5616 true Chr01: 29549980-29555595 Populus trichocarpa
Potri.001G289700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29554596-29555595 Populus trichocarpa
Potri.001G289700 1.0kb downstream 1.0kb downstream 5616 true Chr01: 29548980-29554595 Populus trichocarpa
Potri.001G289700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29548980-29549979 Populus trichocarpa
Potri.001G289700 2.0kb upstream 2.0kb upstream 6616 true Chr01: 29549980-29556595 Populus trichocarpa
Potri.001G289700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29554596-29556595 Populus trichocarpa
Potri.001G289700 2.0kb downstream 2.0kb downstream 6616 true Chr01: 29547980-29554595 Populus trichocarpa
Potri.001G289700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29547980-29549979 Populus trichocarpa
Potri.001G289700 5.0kb upstream 5.0kb upstream 9616 true Chr01: 29549980-29559595 Populus trichocarpa
Potri.001G289700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29554596-29559595 Populus trichocarpa
Potri.001G289700 5.0kb downstream 5.0kb downstream 9616 true Chr01: 29544980-29554595 Populus trichocarpa
Potri.001G289700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29544980-29549979 Populus trichocarpa
Potri.001G289700 10.0kb upstream 10.0kb upstream 14616 true Chr01: 29549980-29564595 Populus trichocarpa
Potri.001G289700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29554596-29564595 Populus trichocarpa
Potri.001G289700 10.0kb downstream 10.0kb downstream 14616 true Chr01: 29539980-29554595 Populus trichocarpa
Potri.001G289700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29539980-29549979 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452937 5262 Malpighiales View MSA
124253420 5268 Malvidae View MSA
124067271 5270 Rosid View MSA
123738003 5271 Pentapetalae View MSA
122792522 5272 Eudicot View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain