Gene : Potri.008G028000 P. trichocarpa v3.1
Defline:  (1 of 3) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  291
Name:  ? Potri.008G028000 Secondary Identifier:  ? PAC:37271631
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G028000 0.5kb upstream 0.5kb upstream 1765 true Chr08: 1504072-1505836 Populus trichocarpa
Potri.008G028000 0.5kb upstream 0.5kb upstream 500 false Chr08: 1504072-1504571 Populus trichocarpa
Potri.008G028000 0.5kb downstream 0.5kb downstream 1765 true Chr08: 1504572-1506336 Populus trichocarpa
Potri.008G028000 0.5kb downstream 0.5kb downstream 500 false Chr08: 1505837-1506336 Populus trichocarpa
Potri.008G028000 1.0kb upstream 1.0kb upstream 2265 true Chr08: 1503572-1505836 Populus trichocarpa
Potri.008G028000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1503572-1504571 Populus trichocarpa
Potri.008G028000 1.0kb downstream 1.0kb downstream 2265 true Chr08: 1504572-1506836 Populus trichocarpa
Potri.008G028000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1505837-1506836 Populus trichocarpa
Potri.008G028000 2.0kb upstream 2.0kb upstream 3265 true Chr08: 1502572-1505836 Populus trichocarpa
Potri.008G028000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1502572-1504571 Populus trichocarpa
Potri.008G028000 2.0kb downstream 2.0kb downstream 3265 true Chr08: 1504572-1507836 Populus trichocarpa
Potri.008G028000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1505837-1507836 Populus trichocarpa
Potri.008G028000 5.0kb upstream 5.0kb upstream 6265 true Chr08: 1499572-1505836 Populus trichocarpa
Potri.008G028000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1499572-1504571 Populus trichocarpa
Potri.008G028000 5.0kb downstream 5.0kb downstream 6265 true Chr08: 1504572-1510836 Populus trichocarpa
Potri.008G028000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1505837-1510836 Populus trichocarpa
Potri.008G028000 10.0kb upstream 10.0kb upstream 11265 true Chr08: 1494572-1505836 Populus trichocarpa
Potri.008G028000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1494572-1504571 Populus trichocarpa
Potri.008G028000 10.0kb downstream 10.0kb downstream 11265 true Chr08: 1504572-1515836 Populus trichocarpa
Potri.008G028000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1505837-1515836 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122464895 5262 Malpighiales View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain