Protein : Pavir.5NG353400.1.p P. virgatum v4.1
Secondary Identifier:  PAC:37574963 Organism Name:  Panicum virgatum
Length:  509   Name:  Pavir.5NG353400.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

5 Protein Domains

DB identifier Type Name
IPR013708 Domain Shikimate dehydrogenase substrate binding, N-terminal
IPR001381 Family 3-dehydroquinate dehydratase type I
IPR013785 Domain Aldolase-type TIM barrel
IPR016040 Domain NAD(P)-binding domain
IPR006151 Domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.5NG353400.1_CDS 1530   Chr05N: 46777164-46804191 Panicum virgatum

30 Ontology Annotations

Ontology Term Db Gene/Protein Name
K13832 KEGG Pavir.5NG353400.1.p
KOG0692 KOG Pavir.5NG353400.1.p
3-DEHYDROQUINATE-DEHYDRATASE-RXN METACYC Pavir.5NG353400.1.p
RXN-12131 METACYC Pavir.5NG353400.1.p
SHIKIMATE-5-DEHYDROGENASE-RXN METACYC Pavir.5NG353400.1.p
PTHR21089 PANTHER Pavir.5NG353400.1.p
PTHR21089:SF11 PANTHER Pavir.5NG353400.1.p
ARO-PWY Pathway Pavir.5NG353400.1.p
PWY-6163 Pathway Pavir.5NG353400.1.p
PF01487 PFAM Pavir.5NG353400.1.p
PF01488 PFAM Pavir.5NG353400.1.p
PF08501 PFAM Pavir.5NG353400.1.p
SSF51569 SSF Pavir.5NG353400.1.p
SSF51735 SSF Pavir.5NG353400.1.p
SSF53223 SSF Pavir.5NG353400.1.p
TIGR01093 TIGRFAMs Pavir.5NG353400.1.p
1.1.1.25 ENZYME Pavir.5NG353400.1.p
4.2.1.10 ENZYME Pavir.5NG353400.1.p
G3DSA:3.20.20.70 GENE3D Pavir.5NG353400.1.p
G3DSA:3.40.192.10 GENE3D Pavir.5NG353400.1.p
G3DSA:3.40.50.720 GENE3D Pavir.5NG353400.1.p
GO:0003824 GO Pavir.5NG353400.1.p
GO:0003855 GO Pavir.5NG353400.1.p
GO:0004764 GO Pavir.5NG353400.1.p
GO:0055114 GO Pavir.5NG353400.1.p
IPR001381 InterPro Pavir.5NG353400.1.p
IPR006151 InterPro Pavir.5NG353400.1.p
IPR013708 InterPro Pavir.5NG353400.1.p
IPR013785 InterPro Pavir.5NG353400.1.p
IPR016040 InterPro Pavir.5NG353400.1.p

4 Pathway Components

Type Key Level Step
      20
      13
      27
      17

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic