Gene : Thecc1EG024023 T. cacao v1.1
Defline:  (1 of 49) PF00385 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) Genomic Order:  1275
Name:  ? Thecc1EG024023 Secondary Identifier:  ? PAC:27422742
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024023 0.5kb upstream 0.5kb upstream 343221 true scaffold_5: 21306384-21649604 Theobroma cacao
Thecc1EG024023 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 21649105-21649604 Theobroma cacao
Thecc1EG024023 0.5kb downstream 0.5kb downstream 343221 true scaffold_5: 21305884-21649104 Theobroma cacao
Thecc1EG024023 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 21305884-21306383 Theobroma cacao
Thecc1EG024023 1.0kb upstream 1.0kb upstream 343721 true scaffold_5: 21306384-21650104 Theobroma cacao
Thecc1EG024023 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 21649105-21650104 Theobroma cacao
Thecc1EG024023 1.0kb downstream 1.0kb downstream 343721 true scaffold_5: 21305384-21649104 Theobroma cacao
Thecc1EG024023 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 21305384-21306383 Theobroma cacao
Thecc1EG024023 2.0kb upstream 2.0kb upstream 344721 true scaffold_5: 21306384-21651104 Theobroma cacao
Thecc1EG024023 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 21649105-21651104 Theobroma cacao
Thecc1EG024023 2.0kb downstream 2.0kb downstream 344721 true scaffold_5: 21304384-21649104 Theobroma cacao
Thecc1EG024023 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 21304384-21306383 Theobroma cacao
Thecc1EG024023 5.0kb upstream 5.0kb upstream 347721 true scaffold_5: 21306384-21654104 Theobroma cacao
Thecc1EG024023 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 21649105-21654104 Theobroma cacao
Thecc1EG024023 5.0kb downstream 5.0kb downstream 347721 true scaffold_5: 21301384-21649104 Theobroma cacao
Thecc1EG024023 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 21301384-21306383 Theobroma cacao
Thecc1EG024023 10.0kb upstream 10.0kb upstream 352721 true scaffold_5: 21306384-21659104 Theobroma cacao
Thecc1EG024023 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 21649105-21659104 Theobroma cacao
Thecc1EG024023 10.0kb downstream 10.0kb downstream 352721 true scaffold_5: 21296384-21649104 Theobroma cacao
Thecc1EG024023 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 21296384-21306383 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823901 5264 Brassicales-Malvales View MSA
124319954 5266 SBM View MSA
124168450 5268 Malvidae View MSA
124038218 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain