Protein : Pavir.3KG446900.1.p P. virgatum v4.1
Secondary Identifier:  PAC:37593333 Organism Name:  Panicum virgatum
Length:  542   Name:  Pavir.3KG446900.1.p
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

6 Protein Domains

DB identifier Type Name
IPR013708 Domain Shikimate dehydrogenase substrate binding, N-terminal
IPR001381 Family 3-dehydroquinate dehydratase type I
IPR011342 Family Shikimate dehydrogenase
IPR013785 Domain Aldolase-type TIM barrel
IPR016040 Domain NAD(P)-binding domain
IPR006151 Domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.3KG446900.1_CDS 1629   Chr03K: 60770560-60775498 Panicum virgatum

34 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0003824 GO Pavir.3KG446900.1.p
GO:0003855 GO Pavir.3KG446900.1.p
G3DSA:3.40.192.10 GENE3D Pavir.3KG446900.1.p
G3DSA:3.40.50.720 GENE3D Pavir.3KG446900.1.p
GO:0050661 GO Pavir.3KG446900.1.p
GO:0055114 GO Pavir.3KG446900.1.p
GO:0004764 GO Pavir.3KG446900.1.p
GO:0019632 GO Pavir.3KG446900.1.p
4.2.1.10 ENZYME Pavir.3KG446900.1.p
G3DSA:3.20.20.70 GENE3D Pavir.3KG446900.1.p
1.1.1.25 ENZYME Pavir.3KG446900.1.p
K13832 KEGG Pavir.3KG446900.1.p
KOG0692 KOG Pavir.3KG446900.1.p
IPR013785 InterPro Pavir.3KG446900.1.p
IPR016040 InterPro Pavir.3KG446900.1.p
SHIKIMATE-5-DEHYDROGENASE-RXN METACYC Pavir.3KG446900.1.p
PTHR21089 PANTHER Pavir.3KG446900.1.p
3-DEHYDROQUINATE-DEHYDRATASE-RXN METACYC Pavir.3KG446900.1.p
RXN-12131 METACYC Pavir.3KG446900.1.p
IPR006151 InterPro Pavir.3KG446900.1.p
IPR001381 InterPro Pavir.3KG446900.1.p
IPR013708 InterPro Pavir.3KG446900.1.p
IPR011342 InterPro Pavir.3KG446900.1.p
TIGR01093 TIGRFAMs Pavir.3KG446900.1.p
SSF53223 SSF Pavir.3KG446900.1.p
TIGR00507 TIGRFAMs Pavir.3KG446900.1.p
PWY-6163 Pathway Pavir.3KG446900.1.p
PF01487 PFAM Pavir.3KG446900.1.p
PTHR21089:SF1 PANTHER Pavir.3KG446900.1.p
ARO-PWY Pathway Pavir.3KG446900.1.p

4 Pathway Components

Type Key Level Step
      20
      13
      27
      17

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic