Protein : Pavir.J538800.1.p P. virgatum v4.1

Secondary Identifier:  PAC:37588877 Organism Name:  Panicum virgatum
Length:  598   Name:  Pavir.J538800.1.p
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Proteins

8 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR023404 Domain Radical SAM, alpha/beta horseshoe
IPR007197 Domain Radical SAM
IPR006638 Domain Elongator protein 3/MiaB/NifB
IPR002792 Domain TRAM domain
IPR023970 Family Methylthiotransferase/radical SAM-type protein
IPR013848 Domain Methylthiotransferase, N-terminal
IPR005839 Family Methylthiotransferase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.J538800.1_CDS 1797   scaffold_456: 31803-35588 Panicum virgatum

29 Ontology Annotations

Ontology Term Db Gene/Protein Name
TIGR00089 TIGRFAMs Pavir.J538800.1.p
SSF102114 SSF Pavir.J538800.1.p
TIGR01574 TIGRFAMs Pavir.J538800.1.p
PS50926 PROFILE Pavir.J538800.1.p
PF04055 PFAM Pavir.J538800.1.p
SM00729 SMART Pavir.J538800.1.p
PS51449 PROFILE Pavir.J538800.1.p
PTHR11918:SF43 PANTHER Pavir.J538800.1.p
PTHR11918 PANTHER Pavir.J538800.1.p
PF01938 PFAM Pavir.J538800.1.p
PF00919 PFAM Pavir.J538800.1.p
IPR023404 InterPro Pavir.J538800.1.p
IPR013848 InterPro Pavir.J538800.1.p
RXN0-5063 METACYC Pavir.J538800.1.p
IPR023970 InterPro Pavir.J538800.1.p
IPR006638 InterPro Pavir.J538800.1.p
IPR005839 InterPro Pavir.J538800.1.p
IPR012340 InterPro Pavir.J538800.1.p
IPR007197 InterPro Pavir.J538800.1.p
GO:0051536 GO Pavir.J538800.1.p
GO:0043412 GO Pavir.J538800.1.p
IPR002792 InterPro Pavir.J538800.1.p
GO:0051539 GO Pavir.J538800.1.p
GO:0003824 GO Pavir.J538800.1.p
G3DSA:3.80.30.20 GENE3D Pavir.J538800.1.p
GO:0016740 GO Pavir.J538800.1.p
GO:0009451 GO Pavir.J538800.1.p
G3DSA:2.40.50.140 GENE3D Pavir.J538800.1.p
2.8.4.3 ENZYME Pavir.J538800.1.p

0 Pathway Components

0 Pathways