Protein : Pavir.J538800.2.p P. virgatum v4.1

Secondary Identifier:  PAC:37588878 Organism Name:  Panicum virgatum
Length:  517   Name:  Pavir.J538800.2.p
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Proteins

8 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR023404 Domain Radical SAM, alpha/beta horseshoe
IPR007197 Domain Radical SAM
IPR006638 Domain Elongator protein 3/MiaB/NifB
IPR002792 Domain TRAM domain
IPR023970 Family Methylthiotransferase/radical SAM-type protein
IPR013848 Domain Methylthiotransferase, N-terminal
IPR005839 Family Methylthiotransferase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.J538800.2_CDS 1554   scaffold_456: 31803-35350 Panicum virgatum

29 Ontology Annotations

Ontology Term Db Gene/Protein Name
2.8.4.3 ENZYME Pavir.J538800.2.p
SSF102114 SSF Pavir.J538800.2.p
SM00729 SMART Pavir.J538800.2.p
TIGR01574 TIGRFAMs Pavir.J538800.2.p
TIGR00089 TIGRFAMs Pavir.J538800.2.p
PF04055 PFAM Pavir.J538800.2.p
PF01938 PFAM Pavir.J538800.2.p
PS51449 PROFILE Pavir.J538800.2.p
PS50926 PROFILE Pavir.J538800.2.p
PTHR11918 PANTHER Pavir.J538800.2.p
RXN0-5063 METACYC Pavir.J538800.2.p
PF00919 PFAM Pavir.J538800.2.p
PTHR11918:SF43 PANTHER Pavir.J538800.2.p
IPR013848 InterPro Pavir.J538800.2.p
IPR012340 InterPro Pavir.J538800.2.p
IPR023970 InterPro Pavir.J538800.2.p
IPR023404 InterPro Pavir.J538800.2.p
IPR005839 InterPro Pavir.J538800.2.p
IPR002792 InterPro Pavir.J538800.2.p
IPR007197 InterPro Pavir.J538800.2.p
IPR006638 InterPro Pavir.J538800.2.p
GO:0043412 GO Pavir.J538800.2.p
GO:0016740 GO Pavir.J538800.2.p
GO:0051539 GO Pavir.J538800.2.p
GO:0051536 GO Pavir.J538800.2.p
G3DSA:3.80.30.20 GENE3D Pavir.J538800.2.p
G3DSA:2.40.50.140 GENE3D Pavir.J538800.2.p
GO:0009451 GO Pavir.J538800.2.p
GO:0003824 GO Pavir.J538800.2.p

0 Pathway Components

0 Pathways