Gene : Pavir.8NG038000 P. virgatum v4.1
Defline:  (1 of 4) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC Genomic Order:  356
Name:  ? Pavir.8NG038000 Secondary Identifier:  ? PAC:37626388
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG038000 0.5kb upstream 0.5kb upstream 7793 true Chr08N: 4919682-4927474 Panicum virgatum
Pavir.8NG038000 0.5kb upstream 0.5kb upstream 500 false Chr08N: 4926975-4927474 Panicum virgatum
Pavir.8NG038000 0.5kb downstream 0.5kb downstream 7793 true Chr08N: 4919182-4926974 Panicum virgatum
Pavir.8NG038000 0.5kb downstream 0.5kb downstream 500 false Chr08N: 4919182-4919681 Panicum virgatum
Pavir.8NG038000 1.0kb upstream 1.0kb upstream 8293 true Chr08N: 4919682-4927974 Panicum virgatum
Pavir.8NG038000 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 4926975-4927974 Panicum virgatum
Pavir.8NG038000 1.0kb downstream 1.0kb downstream 8293 true Chr08N: 4918682-4926974 Panicum virgatum
Pavir.8NG038000 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 4918682-4919681 Panicum virgatum
Pavir.8NG038000 2.0kb upstream 2.0kb upstream 9293 true Chr08N: 4919682-4928974 Panicum virgatum
Pavir.8NG038000 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 4926975-4928974 Panicum virgatum
Pavir.8NG038000 2.0kb downstream 2.0kb downstream 9293 true Chr08N: 4917682-4926974 Panicum virgatum
Pavir.8NG038000 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 4917682-4919681 Panicum virgatum
Pavir.8NG038000 5.0kb upstream 5.0kb upstream 12293 true Chr08N: 4919682-4931974 Panicum virgatum
Pavir.8NG038000 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 4926975-4931974 Panicum virgatum
Pavir.8NG038000 5.0kb downstream 5.0kb downstream 12293 true Chr08N: 4914682-4926974 Panicum virgatum
Pavir.8NG038000 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 4914682-4919681 Panicum virgatum
Pavir.8NG038000 10.0kb upstream 10.0kb upstream 17293 true Chr08N: 4919682-4936974 Panicum virgatum
Pavir.8NG038000 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 4926975-4936974 Panicum virgatum
Pavir.8NG038000 10.0kb downstream 10.0kb downstream 17293 true Chr08N: 4909682-4926974 Panicum virgatum
Pavir.8NG038000 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 4909682-4919681 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122092932 5267 Panicoideae Singleton cluster - no MSA
124582850 5269 Grass View MSA
122048895 5273 Angiosperm View MSA
121311156 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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