Gene : Pavir.2KG283100 P. virgatum v4.1
Defline:  (1 of 2) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  2585
Name:  ? Pavir.2KG283100 Secondary Identifier:  ? PAC:37566343
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2KG283100 0.5kb upstream 0.5kb upstream 19074 true Chr02K: 57239124-57258197 Panicum virgatum
Pavir.2KG283100 0.5kb upstream 0.5kb upstream 500 false Chr02K: 57239124-57239623 Panicum virgatum
Pavir.2KG283100 0.5kb downstream 0.5kb downstream 19074 true Chr02K: 57239624-57258697 Panicum virgatum
Pavir.2KG283100 0.5kb downstream 0.5kb downstream 500 false Chr02K: 57258198-57258697 Panicum virgatum
Pavir.2KG283100 1.0kb upstream 1.0kb upstream 19574 true Chr02K: 57238624-57258197 Panicum virgatum
Pavir.2KG283100 1.0kb upstream 1.0kb upstream 1000 false Chr02K: 57238624-57239623 Panicum virgatum
Pavir.2KG283100 1.0kb downstream 1.0kb downstream 19574 true Chr02K: 57239624-57259197 Panicum virgatum
Pavir.2KG283100 1.0kb downstream 1.0kb downstream 1000 false Chr02K: 57258198-57259197 Panicum virgatum
Pavir.2KG283100 2.0kb upstream 2.0kb upstream 20574 true Chr02K: 57237624-57258197 Panicum virgatum
Pavir.2KG283100 2.0kb upstream 2.0kb upstream 2000 false Chr02K: 57237624-57239623 Panicum virgatum
Pavir.2KG283100 2.0kb downstream 2.0kb downstream 20574 true Chr02K: 57239624-57260197 Panicum virgatum
Pavir.2KG283100 2.0kb downstream 2.0kb downstream 2000 false Chr02K: 57258198-57260197 Panicum virgatum
Pavir.2KG283100 5.0kb upstream 5.0kb upstream 23574 true Chr02K: 57234624-57258197 Panicum virgatum
Pavir.2KG283100 5.0kb upstream 5.0kb upstream 5000 false Chr02K: 57234624-57239623 Panicum virgatum
Pavir.2KG283100 5.0kb downstream 5.0kb downstream 23574 true Chr02K: 57239624-57263197 Panicum virgatum
Pavir.2KG283100 5.0kb downstream 5.0kb downstream 5000 false Chr02K: 57258198-57263197 Panicum virgatum
Pavir.2KG283100 10.0kb upstream 10.0kb upstream 28574 true Chr02K: 57229624-57258197 Panicum virgatum
Pavir.2KG283100 10.0kb upstream 10.0kb upstream 10000 false Chr02K: 57229624-57239623 Panicum virgatum
Pavir.2KG283100 10.0kb downstream 10.0kb downstream 28574 true Chr02K: 57239624-57268197 Panicum virgatum
Pavir.2KG283100 10.0kb downstream 10.0kb downstream 10000 false Chr02K: 57258198-57268197 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180105 5267 Panicoideae View MSA
124583371 5269 Grass View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain