Protein : Pavir.3NG189700.5.p P. virgatum v4.1
Secondary Identifier:  PAC:37641957 Organism Name:  Panicum virgatum
Length:  486   Name:  Pavir.3NG189700.5.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

5 Protein Domains

DB identifier Type Name
IPR013708 Domain Shikimate dehydrogenase substrate binding, N-terminal
IPR001381 Family 3-dehydroquinate dehydratase type I
IPR013785 Domain Aldolase-type TIM barrel
IPR016040 Domain NAD(P)-binding domain
IPR006151 Domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.3NG189700.5_CDS 1461   Chr03N: 35284690-35288259 Panicum virgatum

27 Ontology Annotations

Ontology Term Db Gene/Protein Name
SSF51735 SSF Pavir.3NG189700.5.p
SSF51569 SSF Pavir.3NG189700.5.p
PF08501 PFAM Pavir.3NG189700.5.p
PF01488 PFAM Pavir.3NG189700.5.p
TIGR01093 TIGRFAMs Pavir.3NG189700.5.p
SSF53223 SSF Pavir.3NG189700.5.p
1.1.1.25 ENZYME Pavir.3NG189700.5.p
G3DSA:3.40.50.720 GENE3D Pavir.3NG189700.5.p
G3DSA:3.40.192.10 GENE3D Pavir.3NG189700.5.p
G3DSA:3.20.20.70 GENE3D Pavir.3NG189700.5.p
4.2.1.10 ENZYME Pavir.3NG189700.5.p
PTHR21089 PANTHER Pavir.3NG189700.5.p
SHIKIMATE-5-DEHYDROGENASE-RXN METACYC Pavir.3NG189700.5.p
3-DEHYDROQUINATE-DEHYDRATASE-RXN METACYC Pavir.3NG189700.5.p
IPR016040 InterPro Pavir.3NG189700.5.p
PF01487 PFAM Pavir.3NG189700.5.p
PWY-6163 Pathway Pavir.3NG189700.5.p
ARO-PWY Pathway Pavir.3NG189700.5.p
PTHR21089:SF1 PANTHER Pavir.3NG189700.5.p
GO:0055114 GO Pavir.3NG189700.5.p
GO:0004764 GO Pavir.3NG189700.5.p
GO:0003855 GO Pavir.3NG189700.5.p
GO:0003824 GO Pavir.3NG189700.5.p
IPR013785 InterPro Pavir.3NG189700.5.p
IPR013708 InterPro Pavir.3NG189700.5.p
IPR006151 InterPro Pavir.3NG189700.5.p
IPR001381 InterPro Pavir.3NG189700.5.p

4 Pathway Components

Type Key Level Step
      20
      13
      27
      17

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic