Protein : Pavir.3NG189700.2.p P. virgatum v4.1
Secondary Identifier:  PAC:37641954 Organism Name:  Panicum virgatum
Length:  533   Name:  Pavir.3NG189700.2.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

6 Protein Domains

DB identifier Type Name
IPR013708 Domain Shikimate dehydrogenase substrate binding, N-terminal
IPR001381 Family 3-dehydroquinate dehydratase type I
IPR011342 Family Shikimate dehydrogenase
IPR013785 Domain Aldolase-type TIM barrel
IPR016040 Domain NAD(P)-binding domain
IPR006151 Domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.3NG189700.2_CDS 1602   Chr03N: 35284690-35289886 Panicum virgatum

34 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0003855 GO Pavir.3NG189700.2.p
GO:0003824 GO Pavir.3NG189700.2.p
G3DSA:3.40.50.720 GENE3D Pavir.3NG189700.2.p
G3DSA:3.40.192.10 GENE3D Pavir.3NG189700.2.p
GO:0055114 GO Pavir.3NG189700.2.p
GO:0050661 GO Pavir.3NG189700.2.p
GO:0019632 GO Pavir.3NG189700.2.p
GO:0004764 GO Pavir.3NG189700.2.p
G3DSA:3.20.20.70 GENE3D Pavir.3NG189700.2.p
4.2.1.10 ENZYME Pavir.3NG189700.2.p
1.1.1.25 ENZYME Pavir.3NG189700.2.p
PTHR21089 PANTHER Pavir.3NG189700.2.p
SHIKIMATE-5-DEHYDROGENASE-RXN METACYC Pavir.3NG189700.2.p
RXN-12131 METACYC Pavir.3NG189700.2.p
3-DEHYDROQUINATE-DEHYDRATASE-RXN METACYC Pavir.3NG189700.2.p
PF01487 PFAM Pavir.3NG189700.2.p
PWY-6163 Pathway Pavir.3NG189700.2.p
ARO-PWY Pathway Pavir.3NG189700.2.p
PTHR21089:SF1 PANTHER Pavir.3NG189700.2.p
IPR013708 InterPro Pavir.3NG189700.2.p
IPR011342 InterPro Pavir.3NG189700.2.p
IPR006151 InterPro Pavir.3NG189700.2.p
IPR001381 InterPro Pavir.3NG189700.2.p
KOG0692 KOG Pavir.3NG189700.2.p
K13832 KEGG Pavir.3NG189700.2.p
IPR016040 InterPro Pavir.3NG189700.2.p
IPR013785 InterPro Pavir.3NG189700.2.p
SSF51735 SSF Pavir.3NG189700.2.p
SSF51569 SSF Pavir.3NG189700.2.p
PF08501 PFAM Pavir.3NG189700.2.p

4 Pathway Components

Type Key Level Step
      20
      13
      27
      17

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic