Gene : Thecc1EG034708 T. cacao v1.1
Defline:  (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED Genomic Order:  859
Name:  ? Thecc1EG034708 Secondary Identifier:  ? PAC:27458203
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034708 0.5kb upstream 0.5kb upstream 19488 true scaffold_8: 4421194-4440681 Theobroma cacao
Thecc1EG034708 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4440182-4440681 Theobroma cacao
Thecc1EG034708 0.5kb downstream 0.5kb downstream 19488 true scaffold_8: 4420694-4440181 Theobroma cacao
Thecc1EG034708 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4420694-4421193 Theobroma cacao
Thecc1EG034708 1.0kb upstream 1.0kb upstream 19988 true scaffold_8: 4421194-4441181 Theobroma cacao
Thecc1EG034708 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4440182-4441181 Theobroma cacao
Thecc1EG034708 1.0kb downstream 1.0kb downstream 19988 true scaffold_8: 4420194-4440181 Theobroma cacao
Thecc1EG034708 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4420194-4421193 Theobroma cacao
Thecc1EG034708 2.0kb upstream 2.0kb upstream 20988 true scaffold_8: 4421194-4442181 Theobroma cacao
Thecc1EG034708 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4440182-4442181 Theobroma cacao
Thecc1EG034708 2.0kb downstream 2.0kb downstream 20988 true scaffold_8: 4419194-4440181 Theobroma cacao
Thecc1EG034708 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4419194-4421193 Theobroma cacao
Thecc1EG034708 5.0kb upstream 5.0kb upstream 23988 true scaffold_8: 4421194-4445181 Theobroma cacao
Thecc1EG034708 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4440182-4445181 Theobroma cacao
Thecc1EG034708 5.0kb downstream 5.0kb downstream 23988 true scaffold_8: 4416194-4440181 Theobroma cacao
Thecc1EG034708 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4416194-4421193 Theobroma cacao
Thecc1EG034708 10.0kb upstream 10.0kb upstream 28988 true scaffold_8: 4421194-4450181 Theobroma cacao
Thecc1EG034708 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4440182-4450181 Theobroma cacao
Thecc1EG034708 10.0kb downstream 10.0kb downstream 28988 true scaffold_8: 4411194-4440181 Theobroma cacao
Thecc1EG034708 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4411194-4421193 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822275 5264 Brassicales-Malvales Singleton cluster - no MSA
124318418 5266 SBM Singleton cluster - no MSA
124167073 5268 Malvidae Singleton cluster - no MSA
124051339 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain