Protein Family : RNA-dependent RNA polymerase 1 123752294

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  159

159 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.012120 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 2248   scaffold00154: 1575777-1578024
Cucsa.143700 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 5962   scaffold01080: 27081-33042
Cucsa.143710 (1 of 1) PF05183//PF14259 - RNA dependent RNA polymerase (RdRP) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) C. sativus v1.0 4071   scaffold01080: 35277-39347
Cucsa.280130 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 2335   scaffold02633: 30568-32902
orange1.1g001771m.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. sinensis v1.1 11526   scaffold00027: 638984-650509
AT1G14790 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 A. thaliana TAIR10 RDR1 4072   Chr1: 5093961-5098032
AT2G19930 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 5102   Chr2: 8607340-8612441
AT2G19920 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 4666   Chr2: 8602222-8606887
AT2G19910 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 4938   Chr2: 8595820-8600757
Thhalv10001896m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4743   scaffold_12: 10345298-10350040
Thhalv10001897m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4986   scaffold_12: 10353846-10358831
Thhalv10006629m.g (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 E. salsugineum v1.0 3522   scaffold_5: 10359559-10363080
Ciclev10007331m.g (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. clementina v1.0 11407   scaffold_1: 7390098-7401504
Lus10002361.g (1 of 2) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 L. usitatissimum v1.0 2073   scaffold2788: 14615-16687
Lus10019164.g (1 of 4) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 L. usitatissimum v1.0 3556   scaffold30: 481150-484705
Lus10002910.g (1 of 3) PTHR23079:SF1 - PROTEIN RRF-3 L. usitatissimum v1.0 2630   scaffold3059: 53859-56488
Lus10034262.g (1 of 4) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 L. usitatissimum v1.0 1370   scaffold310: 304763-306132
Lus10012965.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED L. usitatissimum v1.0 8268   scaffold434: 316578-324845
Gorai.001G008800 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED G. raimondii v2.1 12981   Chr01: 813745-826725
Gorai.002G196400 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 2242   Chr02: 53200467-53202708
Gorai.012G183900 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 8017   Chr12: 35118870-35126886
Gorai.013G029000 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 6192   Chr13: 2186726-2192917
Gorai.009G352500 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 2967   Chr09: 45352249-45355215
Thecc1EG011292 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 T. cacao v1.1 13204   scaffold_2: 39226957-39240160
Thecc1EG011293 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 T. cacao v1.1 5496   scaffold_2: 39239903-39245398
Thecc1EG034708 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED T. cacao v1.1 18988   scaffold_8: 4421194-4440181
Migut.K00531 (1 of 1) KOG0988 - RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference M. guttatus v2.0 5772   scaffold_11: 2752315-2758086
Migut.L01176 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 M. guttatus v2.0 6062   scaffold_12: 22126276-22132337
Migut.N01382 (1 of 6) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) M. guttatus v2.0 6703   scaffold_14: 10087078-10093780
Araha.44238s0003 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. halleri v1.1 5324   Scaffold44238: 13576-18899

159 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10007331m C. clementina v1.0 123752294 RNA-dependent RNA polymerase 1 1 5271 Pentapetalae
Lus10002910 L. usitatissimum v1.0 123752294 RNA-dependent RNA polymerase 1 5 5271 Pentapetalae
Lus10002361 L. usitatissimum v1.0 123752294 RNA-dependent RNA polymerase 1 5 5271 Pentapetalae
Gorai.001G008800.1 G. raimondii v2.1 123752294 RNA-dependent RNA polymerase 1 5 5271 Pentapetalae
Gorai.012G183900.1 G. raimondii v2.1 123752294 RNA-dependent RNA polymerase 1 5 5271 Pentapetalae
Migut.L01176.1.p M. guttatus v2.0 123752294 RNA-dependent RNA polymerase 1 3 5271 Pentapetalae
Brara.J01367.1.p B. rapa FPsc v1.3 123752294 RNA-dependent RNA polymerase 1 6 5271 Pentapetalae
Brara.F01003.1.p B. rapa FPsc v1.3 123752294 RNA-dependent RNA polymerase 1 6 5271 Pentapetalae
Brara.I04715.1.p B. rapa FPsc v1.3 123752294 RNA-dependent RNA polymerase 1 6 5271 Pentapetalae
Medtr1g032710.1 M. truncatula Mt4.0v1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Medtr1g032630.1 M. truncatula Mt4.0v1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Medtr1g032590.1 M. truncatula Mt4.0v1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
SapurV1A.0015s0570.1.p S. purpurea v1.0 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Eucgr.C03763.1.p E. grandis v2.0 123752294 RNA-dependent RNA polymerase 1 9 5271 Pentapetalae
Eucgr.C03764.1.p E. grandis v2.0 123752294 RNA-dependent RNA polymerase 1 9 5271 Pentapetalae
Eucgr.B02678.1.p E. grandis v2.0 123752294 RNA-dependent RNA polymerase 1 9 5271 Pentapetalae
Eucgr.B02683.1.p E. grandis v2.0 123752294 RNA-dependent RNA polymerase 1 9 5271 Pentapetalae
Eucgr.L02623.1.p E. grandis v2.0 123752294 RNA-dependent RNA polymerase 1 9 5271 Pentapetalae
Prupe.1G332600.1.p P. persica v2.1 123752294 RNA-dependent RNA polymerase 1 6 5271 Pentapetalae
Prupe.1G334500.1.p P. persica v2.1 123752294 RNA-dependent RNA polymerase 1 6 5271 Pentapetalae
Prupe.1G132100.1.p P. persica v2.1 123752294 RNA-dependent RNA polymerase 1 6 5271 Pentapetalae
Kalax.0015s0043.1.p K. laxiflora v1.1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Kalax.0097s0091.1.p K. laxiflora v1.1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Kalax.1214s0005.1.p K. laxiflora v1.1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Kalax.0003s0064.1.p K. laxiflora v1.1 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
Kaladp0090s0053.1.p K. fedtschenkoi v1.1 123752294 RNA-dependent RNA polymerase 1 1 5271 Pentapetalae
AL7G45360.t1 A. lyrata v2.1 123752294 RNA-dependent RNA polymerase 1 5 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA38214 T. pratense v2 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
DCAR_010692 D. carota v2.0 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae
DCAR_018431 D. carota v2.0 123752294 RNA-dependent RNA polymerase 1 4 5271 Pentapetalae