Gene : Thecc1EG011293 T. cacao v1.1
Defline:  (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 Genomic Order:  3095
Name:  ? Thecc1EG011293 Secondary Identifier:  ? PAC:27459650
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011293 0.5kb upstream 0.5kb upstream 5996 true scaffold_2: 39239903-39245898 Theobroma cacao
Thecc1EG011293 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39245399-39245898 Theobroma cacao
Thecc1EG011293 0.5kb downstream 0.5kb downstream 5996 true scaffold_2: 39239403-39245398 Theobroma cacao
Thecc1EG011293 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39239403-39239902 Theobroma cacao
Thecc1EG011293 1.0kb upstream 1.0kb upstream 6496 true scaffold_2: 39239903-39246398 Theobroma cacao
Thecc1EG011293 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39245399-39246398 Theobroma cacao
Thecc1EG011293 1.0kb downstream 1.0kb downstream 6496 true scaffold_2: 39238903-39245398 Theobroma cacao
Thecc1EG011293 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39238903-39239902 Theobroma cacao
Thecc1EG011293 2.0kb upstream 2.0kb upstream 7496 true scaffold_2: 39239903-39247398 Theobroma cacao
Thecc1EG011293 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39245399-39247398 Theobroma cacao
Thecc1EG011293 2.0kb downstream 2.0kb downstream 7496 true scaffold_2: 39237903-39245398 Theobroma cacao
Thecc1EG011293 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39237903-39239902 Theobroma cacao
Thecc1EG011293 5.0kb upstream 5.0kb upstream 10496 true scaffold_2: 39239903-39250398 Theobroma cacao
Thecc1EG011293 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39245399-39250398 Theobroma cacao
Thecc1EG011293 5.0kb downstream 5.0kb downstream 10496 true scaffold_2: 39234903-39245398 Theobroma cacao
Thecc1EG011293 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39234903-39239902 Theobroma cacao
Thecc1EG011293 10.0kb upstream 10.0kb upstream 15496 true scaffold_2: 39239903-39255398 Theobroma cacao
Thecc1EG011293 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39245399-39255398 Theobroma cacao
Thecc1EG011293 10.0kb downstream 10.0kb downstream 15496 true scaffold_2: 39229903-39245398 Theobroma cacao
Thecc1EG011293 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39229903-39239902 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841233 5264 Brassicales-Malvales View MSA
124347665 5266 SBM View MSA
124252285 5268 Malvidae View MSA
124067400 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain