Protein Family : RNA-dependent RNA polymerase family protein 124347665

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  30

30 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g001771m.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. sinensis v1.1 11526   scaffold00027: 638984-650509
AT1G14790 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 A. thaliana TAIR10 RDR1 4072   Chr1: 5093961-5098032
AT2G19930 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 5102   Chr2: 8607340-8612441
AT2G19910 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 4938   Chr2: 8595820-8600757
Thhalv10001896m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4743   scaffold_12: 10345298-10350040
Thhalv10001897m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4986   scaffold_12: 10353846-10358831
Thhalv10006629m.g (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 E. salsugineum v1.0 3522   scaffold_5: 10359559-10363080
Ciclev10007331m.g (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. clementina v1.0 11407   scaffold_1: 7390098-7401504
Gorai.001G008800 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED G. raimondii v2.1 12981   Chr01: 813745-826725
Gorai.012G183900 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 8017   Chr12: 35118870-35126886
Gorai.013G029000 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 6192   Chr13: 2186726-2192917
Thecc1EG011292 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 T. cacao v1.1 13204   scaffold_2: 39226957-39240160
Thecc1EG011293 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 T. cacao v1.1 5496   scaffold_2: 39239903-39245398
Araha.44238s0003 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. halleri v1.1 5324   Scaffold44238: 13576-18899
Cagra.3501s0013 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 C. grandiflora v1.1 3858   Scaffold3501: 50159-54016
Cagra.8477s0002 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. grandiflora v1.1 10808   Scaffold8477: 9210-20017
Brara.G00096 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 4817   A07: 745790-750606
Brara.G00098 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 4932   A07: 769737-774668
Brara.I04715 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 5089   A09: 40258994-40264082
Brara.J01367 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 4958   A10: 12246526-12251483
Brara.F01003 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 B. rapa FPsc v1.3 3654   A06: 5750710-5754363
Bostr.0124s0180 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 B. stricta v1.2 3977   Scaffold124: 1086955-1090931
Bostr.25281s0001 (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED B. stricta v1.2 5179   Scaffold25281: 324-5502
AL3G48310 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. lyrata v2.1 5147   scaffold_3: 20778983-20784129
AL3G48270 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. lyrata v2.1 5430   scaffold_3: 20750013-20755442
AL7G45360 (1 of 2) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 A. lyrata v2.1 3951   scaffold_7: 19526401-19530351
AL1G26820 (1 of 2) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 A. lyrata v2.1 3805   scaffold_1: 6262720-6266524
Carub.0001s1459 (1 of 1) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 C. rubella v1.1 4101   scaffold_1: 5180837-5184937
Carub.0003s3417 (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. rubella v1.1 5297   scaffold_3: 14508047-14513343
Carub.0003s3418 (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. rubella v1.1 5166   scaffold_3: 14513861-14519026

30 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10007331m C. clementina v1.0 124347665 RNA-dependent RNA polymerase family protein 1 5266 SBM
Gorai.001G008800.1 G. raimondii v2.1 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Gorai.012G183900.1 G. raimondii v2.1 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Araha.44238s0003.1.p A. halleri v1.1 124347665 RNA-dependent RNA polymerase family protein 1 5266 SBM
Brara.J01367.1.p B. rapa FPsc v1.3 124347665 RNA-dependent RNA polymerase family protein 5 5266 SBM
Brara.F01003.1.p B. rapa FPsc v1.3 124347665 RNA-dependent RNA polymerase family protein 5 5266 SBM
AL7G45360.t1 A. lyrata v2.1 124347665 RNA-dependent RNA polymerase family protein 4 5266 SBM
orange1.1g001771m C. sinensis v1.1 124347665 RNA-dependent RNA polymerase family protein 1 5266 SBM
AT2G19930.1 A. thaliana TAIR10 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
AT2G19910.1 A. thaliana TAIR10 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
AT1G14790.1 A. thaliana TAIR10 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Thhalv10006629m E. salsugineum v1.0 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Thhalv10001897m E. salsugineum v1.0 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Thhalv10001896m E. salsugineum v1.0 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Gorai.013G029000.1 G. raimondii v2.1 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Thecc1EG011293t1 T. cacao v1.1 124347665 RNA-dependent RNA polymerase family protein 2 5266 SBM
Thecc1EG011292t2 T. cacao v1.1 124347665 RNA-dependent RNA polymerase family protein 2 5266 SBM
Cagra.8477s0002.1.p C. grandiflora v1.1 124347665 RNA-dependent RNA polymerase family protein 2 5266 SBM
Cagra.3501s0013.1.p C. grandiflora v1.1 124347665 RNA-dependent RNA polymerase family protein 2 5266 SBM
Brara.G00098.1.p B. rapa FPsc v1.3 124347665 RNA-dependent RNA polymerase family protein 5 5266 SBM
Brara.I04715.1.p B. rapa FPsc v1.3 124347665 RNA-dependent RNA polymerase family protein 5 5266 SBM
Brara.G00096.1.p B. rapa FPsc v1.3 124347665 RNA-dependent RNA polymerase family protein 5 5266 SBM
Bostr.25281s0001.1.p B. stricta v1.2 124347665 RNA-dependent RNA polymerase family protein 2 5266 SBM
Bostr.0124s0180.1.p B. stricta v1.2 124347665 RNA-dependent RNA polymerase family protein 2 5266 SBM
AL3G48310.t2 A. lyrata v2.1 124347665 RNA-dependent RNA polymerase family protein 4 5266 SBM
AL3G48270.t1 A. lyrata v2.1 124347665 RNA-dependent RNA polymerase family protein 4 5266 SBM
AL1G26820.t1 A. lyrata v2.1 124347665 RNA-dependent RNA polymerase family protein 4 5266 SBM
Carub.0003s3417.1.p C. rubella v1.1 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Carub.0003s3418.1.p C. rubella v1.1 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM
Carub.0001s1459.1.p C. rubella v1.1 124347665 RNA-dependent RNA polymerase family protein 3 5266 SBM