Gene : Thecc1EG011292 T. cacao v1.1
Defline:  (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 Genomic Order:  3094
Name:  ? Thecc1EG011292 Secondary Identifier:  ? PAC:27464307
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011292 0.5kb upstream 0.5kb upstream 13704 true scaffold_2: 39226957-39240660 Theobroma cacao
Thecc1EG011292 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39240161-39240660 Theobroma cacao
Thecc1EG011292 0.5kb downstream 0.5kb downstream 13704 true scaffold_2: 39226457-39240160 Theobroma cacao
Thecc1EG011292 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39226457-39226956 Theobroma cacao
Thecc1EG011292 1.0kb upstream 1.0kb upstream 14204 true scaffold_2: 39226957-39241160 Theobroma cacao
Thecc1EG011292 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39240161-39241160 Theobroma cacao
Thecc1EG011292 1.0kb downstream 1.0kb downstream 14204 true scaffold_2: 39225957-39240160 Theobroma cacao
Thecc1EG011292 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39225957-39226956 Theobroma cacao
Thecc1EG011292 2.0kb upstream 2.0kb upstream 15204 true scaffold_2: 39226957-39242160 Theobroma cacao
Thecc1EG011292 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39240161-39242160 Theobroma cacao
Thecc1EG011292 2.0kb downstream 2.0kb downstream 15204 true scaffold_2: 39224957-39240160 Theobroma cacao
Thecc1EG011292 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39224957-39226956 Theobroma cacao
Thecc1EG011292 5.0kb upstream 5.0kb upstream 18204 true scaffold_2: 39226957-39245160 Theobroma cacao
Thecc1EG011292 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39240161-39245160 Theobroma cacao
Thecc1EG011292 5.0kb downstream 5.0kb downstream 18204 true scaffold_2: 39221957-39240160 Theobroma cacao
Thecc1EG011292 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39221957-39226956 Theobroma cacao
Thecc1EG011292 10.0kb upstream 10.0kb upstream 23204 true scaffold_2: 39226957-39250160 Theobroma cacao
Thecc1EG011292 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39240161-39250160 Theobroma cacao
Thecc1EG011292 10.0kb downstream 10.0kb downstream 23204 true scaffold_2: 39216957-39240160 Theobroma cacao
Thecc1EG011292 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39216957-39226956 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841233 5264 Brassicales-Malvales View MSA
124347665 5266 SBM View MSA
124252285 5268 Malvidae View MSA
124067400 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain