Protein Family : RNA-dependent RNA polymerase 1 124067400

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  91

91 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.143700 (1 of 9) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. sativus v1.0 5962   scaffold01080: 27081-33042
Cucsa.143710 (1 of 1) PF05183//PF14259 - RNA dependent RNA polymerase (RdRP) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) C. sativus v1.0 4071   scaffold01080: 35277-39347
orange1.1g001771m.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. sinensis v1.1 11526   scaffold00027: 638984-650509
AT1G14790 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 A. thaliana TAIR10 RDR1 4072   Chr1: 5093961-5098032
AT2G19930 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 5102   Chr2: 8607340-8612441
AT2G19910 (1 of 3) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. thaliana TAIR10 4938   Chr2: 8595820-8600757
Thhalv10001896m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4743   scaffold_12: 10345298-10350040
Thhalv10001897m.g (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED E. salsugineum v1.0 4986   scaffold_12: 10353846-10358831
Thhalv10006629m.g (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 E. salsugineum v1.0 3522   scaffold_5: 10359559-10363080
Ciclev10007331m.g (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) C. clementina v1.0 11407   scaffold_1: 7390098-7401504
Lus10019164.g (1 of 4) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 L. usitatissimum v1.0 3556   scaffold30: 481150-484705
Lus10012965.g (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED L. usitatissimum v1.0 8268   scaffold434: 316578-324845
Gorai.001G008800 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED G. raimondii v2.1 12981   Chr01: 813745-826725
Gorai.012G183900 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 8017   Chr12: 35118870-35126886
Gorai.013G029000 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) G. raimondii v2.1 6192   Chr13: 2186726-2192917
Thecc1EG011292 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 T. cacao v1.1 13204   scaffold_2: 39226957-39240160
Thecc1EG011293 (1 of 2) PTHR23079//PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE // RNA-DEPENDENT RNA POLYMERASE 1 T. cacao v1.1 5496   scaffold_2: 39239903-39245398
Araha.44238s0003 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED A. halleri v1.1 5324   Scaffold44238: 13576-18899
Cagra.3501s0013 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 C. grandiflora v1.1 3858   Scaffold3501: 50159-54016
Cagra.8477s0002 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED C. grandiflora v1.1 10808   Scaffold8477: 9210-20017
Glyma.07G171400 (1 of 2) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 G. max Wm82.a2.v1 7736   Chr07: 29654937-29662672
Glyma.01G008700 (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED G. max Wm82.a2.v1 12394   Chr01: 841903-854296
Glyma.02G086100 (1 of 2) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 G. max Wm82.a2.v1 10341   Chr02: 7499967-7510307
Brara.G00096 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 4817   A07: 745790-750606
Brara.G00098 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 4932   A07: 769737-774668
Brara.I04715 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 5089   A09: 40258994-40264082
Brara.J01367 (1 of 8) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) B. rapa FPsc v1.3 4958   A10: 12246526-12251483
Brara.F01003 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 B. rapa FPsc v1.3 3654   A06: 5750710-5754363
Bostr.0124s0180 (1 of 1) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 B. stricta v1.2 3977   Scaffold124: 1086955-1090931
Bostr.25281s0001 (1 of 2) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED B. stricta v1.2 5179   Scaffold25281: 324-5502

91 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10007331m C. clementina v1.0 124067400 RNA-dependent RNA polymerase 1 1 5270 Rosid
Gorai.001G008800.1 G. raimondii v2.1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Gorai.012G183900.1 G. raimondii v2.1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Araha.44238s0003.1.p A. halleri v1.1 124067400 RNA-dependent RNA polymerase 1 1 5270 Rosid
Brara.J01367.1.p B. rapa FPsc v1.3 124067400 RNA-dependent RNA polymerase 1 5 5270 Rosid
Brara.F01003.1.p B. rapa FPsc v1.3 124067400 RNA-dependent RNA polymerase 1 5 5270 Rosid
Medtr1g032630.1 M. truncatula Mt4.0v1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Medtr1g032590.1 M. truncatula Mt4.0v1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
SapurV1A.0015s0570.1.p S. purpurea v1.0 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Eucgr.B02678.1.p E. grandis v2.0 124067400 RNA-dependent RNA polymerase 1 6 5270 Rosid
Eucgr.B02683.1.p E. grandis v2.0 124067400 RNA-dependent RNA polymerase 1 6 5270 Rosid
Eucgr.L02623.1.p E. grandis v2.0 124067400 RNA-dependent RNA polymerase 1 6 5270 Rosid
Prupe.1G332600.1.p P. persica v2.1 124067400 RNA-dependent RNA polymerase 1 4 5270 Rosid
Prupe.1G334500.1.p P. persica v2.1 124067400 RNA-dependent RNA polymerase 1 4 5270 Rosid
AL7G45360.t1 A. lyrata v2.1 124067400 RNA-dependent RNA polymerase 1 4 5270 Rosid
Phvul.003G016800.1.p P. vulgaris v2.1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Phvul.003G016600.2.p P. vulgaris v2.1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Potri.008G136100.1.p P. trichocarpa v3.1 124067400 RNA-dependent RNA polymerase 1 6 5270 Rosid
Podel.06G173800.1.p P. deltoides WV94 v2.1 124067400 RNA-dependent RNA polymerase 1 5 5270 Rosid
Podel.10G102500.1.p P. deltoides WV94 v2.1 124067400 RNA-dependent RNA polymerase 1 5 5270 Rosid
VIT_201s0011g05870.1 V. vinifera v2.1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
VIT_211s0016g03220.1 V. vinifera v2.1 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
MD13G1041300 M. domestica v1.1 124067400 RNA-dependent RNA polymerase 1 8 5270 Rosid
MD16G1017600 M. domestica v1.1 124067400 RNA-dependent RNA polymerase 1 8 5270 Rosid
MD02G1064400 M. domestica v1.1 124067400 RNA-dependent RNA polymerase 1 8 5270 Rosid
Ca_15154 C. arietinum v1.0 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
Ca_15153 C. arietinum v1.0 124067400 RNA-dependent RNA polymerase 1 3 5270 Rosid
gene06235-v1.0-hybrid.t1 F. vesca v2.0.a2 124067400 RNA-dependent RNA polymerase 1 4 5270 Rosid
gene11284-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 124067400 RNA-dependent RNA polymerase 1 4 5270 Rosid
Cucsa.143700.1 C. sativus v1.0 124067400 RNA-dependent RNA polymerase 1 2 5270 Rosid