Gene : Glyma.01G008700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED Genomic Order:  87
Name:  ? Glyma.01G008700 Secondary Identifier:  ? PAC:30543146
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G008700 0.5kb upstream 0.5kb upstream 12894 true Chr01: 841903-854796 Glycine max
Glyma.01G008700 0.5kb upstream 0.5kb upstream 500 false Chr01: 854297-854796 Glycine max
Glyma.01G008700 0.5kb downstream 0.5kb downstream 12894 true Chr01: 841403-854296 Glycine max
Glyma.01G008700 0.5kb downstream 0.5kb downstream 500 false Chr01: 841403-841902 Glycine max
Glyma.01G008700 1.0kb upstream 1.0kb upstream 13394 true Chr01: 841903-855296 Glycine max
Glyma.01G008700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 854297-855296 Glycine max
Glyma.01G008700 1.0kb downstream 1.0kb downstream 13394 true Chr01: 840903-854296 Glycine max
Glyma.01G008700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 840903-841902 Glycine max
Glyma.01G008700 2.0kb upstream 2.0kb upstream 14394 true Chr01: 841903-856296 Glycine max
Glyma.01G008700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 854297-856296 Glycine max
Glyma.01G008700 2.0kb downstream 2.0kb downstream 14394 true Chr01: 839903-854296 Glycine max
Glyma.01G008700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 839903-841902 Glycine max
Glyma.01G008700 5.0kb upstream 5.0kb upstream 17394 true Chr01: 841903-859296 Glycine max
Glyma.01G008700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 854297-859296 Glycine max
Glyma.01G008700 5.0kb downstream 5.0kb downstream 17394 true Chr01: 836903-854296 Glycine max
Glyma.01G008700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 836903-841902 Glycine max
Glyma.01G008700 10.0kb upstream 10.0kb upstream 22394 true Chr01: 841903-864296 Glycine max
Glyma.01G008700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 854297-864296 Glycine max
Glyma.01G008700 10.0kb downstream 10.0kb downstream 22394 true Chr01: 831903-854296 Glycine max
Glyma.01G008700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 831903-841902 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307456 5265 Fabidae View MSA
124067400 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.25005 0.0 1.18489   Low
cufflinks 1.90438 0.0 7.60852    
cufflinks 1.50363 0.0 4.91942    
cufflinks 1.48929 0.0 7.64085    
cufflinks 3.74304 0.0 14.2233    
cufflinks 0.528446 0.0 2.31908    
cufflinks 1.88958 0.0 7.50655    
cufflinks 1.12525 0.0 5.36814    
cufflinks 21.104 0.0 88.3721 High High
cufflinks 0.085     Low  
cufflinks 0.065        
cufflinks 0.354        
cufflinks 0.15        
cufflinks 0.051     Low  
cufflinks 2.679       High
cufflinks 0.058     Low  
cufflinks 0.18        
cufflinks 0.42       High
cufflinks 0.208        
cufflinks 0.06     Low  
cufflinks 0.097        
cufflinks 0.062     Low  
cufflinks 0.05     Low  
cufflinks 0.084        
cufflinks 0.046     Low  
cufflinks 0.337        

0 Strain