Gene : Cagra.8477s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23079:SF13 - RNA-DEPENDENT RNA POLYMERASE 3-RELATED Genomic Order:  2
Name:  ? Cagra.8477s0002 Secondary Identifier:  ? PAC:28898658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8477s0002 0.5kb upstream 0.5kb upstream 11308 true Scaffold8477: 9210-20517 Capsella grandiflora
Cagra.8477s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8477: 20018-20517 Capsella grandiflora
Cagra.8477s0002 0.5kb downstream 0.5kb downstream 11308 true Scaffold8477: 8710-20017 Capsella grandiflora
Cagra.8477s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8477: 8710-9209 Capsella grandiflora
Cagra.8477s0002 1.0kb upstream 1.0kb upstream 11808 true Scaffold8477: 9210-21017 Capsella grandiflora
Cagra.8477s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8477: 20018-21017 Capsella grandiflora
Cagra.8477s0002 1.0kb downstream 1.0kb downstream 11808 true Scaffold8477: 8210-20017 Capsella grandiflora
Cagra.8477s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8477: 8210-9209 Capsella grandiflora
Cagra.8477s0002 2.0kb upstream 2.0kb upstream 12808 true Scaffold8477: 9210-22017 Capsella grandiflora
Cagra.8477s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8477: 20018-22017 Capsella grandiflora
Cagra.8477s0002 2.0kb downstream 2.0kb downstream 12808 true Scaffold8477: 7210-20017 Capsella grandiflora
Cagra.8477s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8477: 7210-9209 Capsella grandiflora
Cagra.8477s0002 5.0kb upstream 5.0kb upstream 15808 true Scaffold8477: 9210-25017 Capsella grandiflora
Cagra.8477s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold8477: 20018-25017 Capsella grandiflora
Cagra.8477s0002 5.0kb downstream 5.0kb downstream 15808 true Scaffold8477: 4210-20017 Capsella grandiflora
Cagra.8477s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold8477: 4210-9209 Capsella grandiflora
Cagra.8477s0002 10.0kb upstream 10.0kb upstream 20808 true Scaffold8477: 9210-30017 Capsella grandiflora
Cagra.8477s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold8477: 20018-30017 Capsella grandiflora
Cagra.8477s0002 10.0kb downstream 10.0kb downstream 20017 true Scaffold8477: 1-20017 Capsella grandiflora
Cagra.8477s0002 10.0kb downstream 10.0kb downstream 9209 false Scaffold8477: 1-9209 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381039 5261 Brassicaceae View MSA
123835073 5264 Brassicales-Malvales View MSA
124347665 5266 SBM View MSA
124252285 5268 Malvidae View MSA
124067400 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain