Gene : Thecc1EG035500 T. cacao v1.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1448
Name:  ? Thecc1EG035500 Secondary Identifier:  ? PAC:27458073
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035500 0.5kb upstream 0.5kb upstream 2782 true scaffold_8: 9512532-9515313 Theobroma cacao
Thecc1EG035500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9514814-9515313 Theobroma cacao
Thecc1EG035500 0.5kb downstream 0.5kb downstream 2782 true scaffold_8: 9512032-9514813 Theobroma cacao
Thecc1EG035500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9512032-9512531 Theobroma cacao
Thecc1EG035500 1.0kb upstream 1.0kb upstream 3282 true scaffold_8: 9512532-9515813 Theobroma cacao
Thecc1EG035500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9514814-9515813 Theobroma cacao
Thecc1EG035500 1.0kb downstream 1.0kb downstream 3282 true scaffold_8: 9511532-9514813 Theobroma cacao
Thecc1EG035500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9511532-9512531 Theobroma cacao
Thecc1EG035500 2.0kb upstream 2.0kb upstream 4282 true scaffold_8: 9512532-9516813 Theobroma cacao
Thecc1EG035500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9514814-9516813 Theobroma cacao
Thecc1EG035500 2.0kb downstream 2.0kb downstream 4282 true scaffold_8: 9510532-9514813 Theobroma cacao
Thecc1EG035500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9510532-9512531 Theobroma cacao
Thecc1EG035500 5.0kb upstream 5.0kb upstream 7282 true scaffold_8: 9512532-9519813 Theobroma cacao
Thecc1EG035500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9514814-9519813 Theobroma cacao
Thecc1EG035500 5.0kb downstream 5.0kb downstream 7282 true scaffold_8: 9507532-9514813 Theobroma cacao
Thecc1EG035500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9507532-9512531 Theobroma cacao
Thecc1EG035500 10.0kb upstream 10.0kb upstream 12282 true scaffold_8: 9512532-9524813 Theobroma cacao
Thecc1EG035500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9514814-9524813 Theobroma cacao
Thecc1EG035500 10.0kb downstream 10.0kb downstream 12282 true scaffold_8: 9502532-9514813 Theobroma cacao
Thecc1EG035500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9502532-9512531 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825288 5264 Brassicales-Malvales View MSA
124348217 5266 SBM View MSA
124246768 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain